API for NWPU-903PR/DMDeepm6A1.0
Identify single base m6A and DM m6A from MeRIP-Seq data
| Global functions | |
|---|---|
| .annosite | Source code |
| .bamReadsCount | Source code |
| .combineListOfSplicing | Source code |
| .combineprobs | Source code |
| .conind | Source code |
| .constructPsuedoGene | Source code |
| .diffmethytest | Source code |
| .extendSeq | Source code |
| .extractComponent | Source code |
| .findTranscriptCluster | Source code |
| .getMotifSeq | Source code |
| .getconsensussite | Source code |
| .getdeseqsizefactor | Source code |
| .getexomepeakinput | Source code |
| .getinput | Source code |
| .getmotifreads | Source code |
| .getpeakposition | Source code |
| .getpredict | Source code |
| .getsf | Source code |
| .getsfm | Source code |
| .gettotalsf | Source code |
| .getxls | Source code |
| .makeInput | Source code |
| .makeInputMat | Source code |
| .makePeak2Motif | Source code |
| .makePeak2SB | Source code |
| .makePsuedoGeneFromTXDB | Source code |
| .makeSBpeak | Source code |
| .modelpredict | Source code |
| .modelselect | Source code |
| .normalizeReads | Source code |
| .sampleinput | Source code |
| .seq2vec | Source code |
| .spliceSingleTrans | Source code |
| .tx2gene | Source code |
| .writeSiteAnno | Source code |
| BED12toGRangesList | Source code |
| deepm6A | Man page Source code |
| dmdeepm6A | Man page Source code |
| dmtest | Man page Source code |
