computeMdrr | Compute the minimum detectable relative risk |
computePreExposureGainP | Compute P for pre-exposure risk gain |
computeTimeStability | Compute stability of outcome rate over time |
createAgeCovariateSettings | Create age covariate settings |
createCalendarTimeCovariateSettings | Create calendar time settings |
createControlIntervalSettings | Create control interval settings |
createCreateSccsIntervalDataArgs | Create a parameter object for the function... |
createCreateScriIntervalDataArgs | Create a parameter object for the function... |
createCreateStudyPopulationArgs | Create a parameter object for the function... |
createDefaultSccsMultiThreadingSettings | Create default SelfControlledCaseSeries multi-threading... |
createEraCovariateSettings | Create era covariate settings |
createExposure | Create exposure definition |
createExposuresOutcome | Create a exposures-outcome combination. |
createFitSccsModelArgs | Create a parameter object for the function fitSccsModel |
createGetDbSccsDataArgs | Create a parameter object for the function getDbSccsData |
createResultsDataModel | Create the results data model tables on a database server. |
createSccsAnalysis | Create a SelfControlledCaseSeries analysis specification |
createSccsDiagnosticThresholds | Create SCCS diagnostics thresholds |
createSccsIntervalData | Create SCCS era data |
createSccsMultiThreadingSettings | Create SelfControlledCaseSeries multi-threading settings |
createSccsSimulationSettings | Create SCCS simulation settings |
createScriIntervalData | Create Self-Controlled Risk Interval (SCRI) era data |
createSeasonalityCovariateSettings | Create seasonality settings |
createSimulationRiskWindow | Create a risk window definition for simulation |
createStudyPopulation | Create a study population |
cyclicSplineDesign | Create a design matrix for a cyclic spline |
exportToCsv | Export SCCSresults to CSV files |
fitSccsModel | Fit the SCCS model |
getAttritionTable | Get the attrition table for a population |
getDataMigrator | Get database migrations instance |
getDbSccsData | Load data for SCCS from the database |
getFileReference | Get file reference |
getModel | Output the full model |
getResultsDataModelSpecifications | Get specifications for SelfControlledCaseSeries results data... |
getResultsSummary | Get a summary report of the analyses results |
hasAgeEffect | Does the model contain an age effect? |
hasCalendarTimeEffect | Does the model contain an age effect? |
hasSeasonality | Does the model contain an age effect? |
isSccsData | Check whether an object is a SccsData object |
isSccsIntervalData | Check whether an object is a SccsIntervalData object |
loadExposuresOutcomeList | Load a list of 'ExposuresOutcome' from file |
loadSccsAnalysisList | Load a list of sccsAnalysis from file |
loadSccsData | Load the cohort method data from a file |
loadSccsIntervalData | Load the cohort method data from a file |
migrateDataModel | Migrate Data model |
plotAgeEffect | Plot the age effect |
plotAgeSpans | Plot the age ranges spanned by each observation period. |
plotCalendarTimeEffect | Plot the calendar time effect |
plotCalendarTimeSpans | Plot the calendar time ranges spanned by each observation... |
plotEventObservationDependence | Plot time from event to observation end for censored and... |
plotEventToCalendarTime | Plot the ratio of observed to expected events over calendar... |
plotExposureCentered | Plot information centered around the start of exposure |
plotSeasonality | Plot the seasonality effect |
runSccsAnalyses | Run a list of analyses |
saveExposuresOutcomeList | Save a list of 'ExposuresOutcome' to file |
saveSccsAnalysisList | Save a list of SccsAnalysis to file |
saveSccsData | Save the cohort method data to file |
saveSccsIntervalData | Save the cohort method data to file |
SccsData-class | SCCS Data |
SccsIntervalData-class | SCCS Interval Data |
SelfControlledCaseSeries-package | SelfControlledCaseSeries: Self-Controlled Case Series |
simulateSccsData | Simulate SCCS data |
uploadResults | Upload results to the database server. |
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