Provides well-tested wrappers for narrow functions of several binary packages, including plink1 and plink2 (limited capabilities), gcta, bolt, gemma, and emmax. Focuses on approaches for genetic association, population structure (kinship/GRM matrices and PCA), and heritability estimation. Outputs are omitted unless there are errors (for easier debugging). Parsers for the various output tables are also provided. Complements the `genio` package (which focuses on parsing and not on binary wrappers).
Package details |
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Maintainer | |
License | GPL (>= 3) |
Version | 0.0.9.9000 |
URL | https://github.com/OchoaLab/genbin |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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