OchoaLab/genbin: R wrappers for binaries in genetics

Provides well-tested wrappers for narrow functions of several binary packages, including plink1 and plink2 (limited capabilities), gcta, bolt, gemma, and emmax. Focuses on approaches for genetic association, population structure (kinship/GRM matrices and PCA), and heritability estimation. Outputs are omitted unless there are errors (for easier debugging). Parsers for the various output tables are also provided. Complements the `genio` package (which focuses on parsing and not on binary wrappers).

Getting started

Package details

Maintainer
LicenseGPL (>= 3)
Version0.0.9.9000
URL https://github.com/OchoaLab/genbin
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("OchoaLab/genbin")
OchoaLab/genbin documentation built on Nov. 14, 2024, 7:33 p.m.