OchoaLab/popkinsuppl: Supplement to popkin package

Provides custom implementations of existing statistical genetics estimators, designed to work on extremely large files and handle missing data. Includes the Standard Kinship estimator (mean-of-ratios and ratio-of-means versions), and the Weir-Cockerham, Weir-Hill, Hudson pairwise, and Generalized "Hudson" FST estimators. Also calculates the limits of several biased kinship estimators.

Getting started

Package details

Maintainer
LicenseGPL-3
Version1.0.18.9000
URL https://github.com/OchoaLab/popkinsuppl
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("OchoaLab/popkinsuppl")
OchoaLab/popkinsuppl documentation built on May 17, 2022, 9:50 a.m.