Man pages for Peccary-PMX/Peccary
PD and PK results
| AllPlots | Create a PDF file with lots of pot in a single page, to have... |
| bining | bining To transform a string of numbers into numbers (only... |
| compteur | compteur Function for auto-incrementation. used for saving... |
| createFolder | Folder Initialization |
| createRun | Create a run object with the pathway Author: Thibaud Derippe... |
| depot | ODE monolix |
| deSolve_pecc | deSolve_pecc |
| dossier_fill_COMMUN-set | dossier_fill_COMMUN Author: Thibaud Derippe |
| dossier_fill_COMMUN-set-folder-method | Fill the dossier with NONMEM or Monolix runs Author: Thibaud... |
| filter_decomposer | Filter decomposition |
| find_runs | Giving a path of a folder and the software, it search every... |
| folder-class | SetClass S4 Dossier Object Author: Thibaud Derippe... |
| ggplot_pecc | Ggplot + theme_bw + title/subtitle centered + caption left... |
| NCA_boxplot | Non Compartimental Analysis (Warning, ongoing development) |
| NCA_covariate | Non Compartimental Analysis (Warning, ongoing development) |
| NCA_report | Non Compartimental Analysis (Warning, ongoing development) |
| ode_nonmem | DeSolve pharmacometrics model creator |
| peccary_app | #' @export dossier <- new("folder") #' @export explo <-... |
| peccary_FO_COV-folder-method | Objective Function Comparison through covariate |
| peccary_NCA | Non Compartimental Analysis (Warning, ongoing development) |
| pecc_count | Peccary count |
| pecc_dataset_creation | Dataset creation for Monolix and NONMEM |
| plot_GOF | Goodness of Fits Plots |
| plot_NCA | Non Compartimental Analysis (Warning, ongoing development) |
| plot_pred | Prediction Plots |
| plot_pred_dist | Plot Pred Dist |
| plot_random_effect_cov-run-method | BoxPlot according covariabe Author: Thibaud Derippe... |
| plot_random_effect_matrix-run-method | Random Effect Matrix Author: Thibaud Derippe Arguments:... |
| plot_spagh | Spaghetti plot |
| plot_spagh2 | filter<- "YTYPE == 1" facetgrid <- "" facetwrap <- ""... |
| plot_vpc | Visual Prediction Check |
| project-class | SetClass S4 run Object Author: Thibaud Derippe |
| project_fill-set | dossier_fill_COMMUN Author: Thibaud Derippe |
| readTablePerso | readTablePerso |
| results-run-method | Create a df with every run selected |
| run-class | SetClass S4 run Object Author: Thibaud Derippe |
| runIndivi | runIndivi To transform a string of numbers into numbers (only... |
| scale_y_log10_pecc | Ggplot + theme_bw + plot.(sub)title(element.text =... |
| select_run-folder-method | From a folder give the run Author: Thibaud Derippe Arguments:... |
| setPath_MONOLIX2019-set | setPath_MONOLIX Author: Thibaud Derippe |
| setPath_MONOLIX2019-set-run-method | SetReplaceMethod to fill a run object with the corresponding... |
| setPath_MONOLIX-set | setPath_MONOLIX Author: Thibaud Derippe |
| setPath_MONOLIX-set-run-method | SetReplaceMethod to fill a run object with the corresponding... |
| setPath_NONMEM-set | setPath_NONMEM Author: Thibaud Derippe |
| setPath_NONMEM-set-run-method | SetReplaceMethod to fill a run object with the corresponding... |
| stringToNumbers | string to number To transform a string of numbers into... |
