Files in PhilBoileau/scPCA
Sparse Contrastive Principal Component Analysis
.Rbuildignore
.gitignore
.travis.yml
CONTRIBUTING.md
DESCRIPTION
LICENSE
LICENSE.md
Makefile
NAMESPACE
NEWS.md
R/checkArgs.R
R/contrastiveCov.R
R/covMat.R
R/exampleData.R
R/fitCPCA.R
R/fitGrid.R
R/safeColScale.R
R/scPCA.R
R/spcaWrapper.R
README.Rmd
README.md
_pkgdown.yml
appveyor.yml
codecov.yml
data/background_df.rda
data/toy_df.rda
docs/articles/scpca_intro_files/figure-html/PCA_sim-1.png
docs/articles/scpca_intro_files/figure-html/cPCA_sim-1.png
docs/articles/scpca_intro_files/figure-html/microbenchmark_comparison-1.png
docs/articles/scpca_intro_files/figure-html/plot_cv_cPCA_scPCA-1.png
docs/articles/scpca_intro_files/figure-html/plot_red_dims-1.png
docs/articles/scpca_intro_files/figure-html/sPCA_sim-1.png
docs/articles/scpca_intro_files/figure-html/scPCA_sim-1.png
docs/articles/scpca_intro_files/figure-html/scPCA_sim-2.png
docs/articles/scpca_intro_files/header-attrs-2.6/header-attrs.js
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/figures/README-pressure-1.png
inst/CITATION
inst/REFERENCES.bib
man/background_df.Rd
man/bpContrastiveCov.Rd
man/bpFitCPCA.Rd
man/bpFitGrid.Rd
man/checkArgs.Rd
man/contrastiveCov.Rd
man/covMat.Rd
man/cvSelectParams.Rd
man/figures/README-pressure-1.png
man/fitCPCA.Rd
man/fitGrid.Rd
man/safeColScale.Rd
man/scPCA.Rd
man/selectParams.Rd
man/spcaWrapper.Rd
man/toy_df.Rd
manuscript/paper.bib
manuscript/paper.md
tests/testthat.R
tests/testthat/test-checkArgs.R
tests/testthat/test-contrastiveCov.R
tests/testthat/test-covMat.R
tests/testthat/test-fitCPCA.R
tests/testthat/test-fitGrid.R
tests/testthat/test-safeColScale.R
tests/testthat/test-scPCA.R
vignettes/scpca_intro.Rmd
