Files in PhilPalmer/AutoPlate
AutoPlate
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/app_config.R
R/app_server.R
R/app_ui.R
R/autoplate-package.R
R/data.R
R/fct_1_input.R
R/fct_2_qc.R
R/fct_3_results.R
R/run_app.R
README.Rmd
README.md
app.R
autoplate.Rproj
codecov.yml
cran-comments.md
data-raw/dilutions.R
data-raw/dilutions_ella.csv
data-raw/dilutions_pmn.csv
data-raw/example_data.R
data-raw/example_data_column_descriptions.csv
data-raw/example_data_pmn_plate_n1.csv
data-raw/example_data_pmn_platelist_H1N1.csv
data/dilutions_ella.rda
data/dilutions_pmn.rda
data/example_data_column_descriptions.rda
data/example_data_pmn_plate_n1.rda
data/example_data_pmn_platelist_H1N1.rda
dev/01_start.R
dev/02_dev.R
dev/03_deploy.R
dev/run_dev.R
inst/app/www/favicon.png
inst/app/www/report.Rmd
inst/app/www/styles.css
inst/golem-config.yml
man/assay_to_plate_df.Rd
man/assay_to_prism_df.Rd
man/autoplate-package.Rd
man/calc_neut.Rd
man/dilutions_ella.Rd
man/dilutions_pmn.Rd
man/ella_to_assay_df.Rd
man/example_data_column_descriptions.Rd
man/example_data_pmn_plate_n1.Rd
man/example_data_pmn_platelist_H1N1.Rd
man/exclude_wells.Rd
man/figures/README-drc_plot-1.png
man/figures/home.png
man/figures/input.png
man/figures/logo.png
man/figures/pmn_autoplate.jpg
man/figures/quality_control.png
man/figures/results.png
man/figures/uni_of_cam_logo.png
man/init_assay_df.Rd
man/init_av_lum_df.Rd
man/init_cols.Rd
man/init_sample.Rd
man/init_samples.Rd
man/init_title.Rd
man/init_types.Rd
man/init_types_boxplot.Rd
man/plot_cv_boxplot.Rd
man/plot_data_exploration.Rd
man/plot_drc.Rd
man/plot_heatmap.Rd
man/plot_ic50_boxplot.Rd
man/read_plus.Rd
man/replace_names.Rd
man/run_app.Rd
man/update_col_types.Rd
man/update_cols_order.Rd
man/update_dilutions.Rd
man/update_feature_plate.Rd
man/update_sample_ids.Rd
pkgdown/_pkgdown.yml
tests/testthat.R
tests/testthat/test-app.R
tests/testthat/test-golem-recommended.R
vignettes/images/1_1_assay_type.png
vignettes/images/1_2_input_files.png
vignettes/images/1_3_ella_dilutions.png
vignettes/images/1_3_pmn_dilutions.png
vignettes/images/1_4_exclude_table.png
vignettes/images/1_4_rlu_heatmap.png
vignettes/images/1_4_types_table.png
vignettes/images/1_5_other_features_input.png
vignettes/images/1_5_other_features_output.png
vignettes/images/2_1_av_lum_table.png
vignettes/images/2_2_types_heatmap.png
vignettes/images/2_3_types_boxplot.png
vignettes/images/2_4_exclude_wells.png
vignettes/images/2_5_download_full.png
vignettes/images/2_6_download_prism.png
vignettes/images/3_1_data_exploration.png
vignettes/images/3_2_drc.png
vignettes/images/3_3_download_ied.png
vignettes/images/3_3_ic50_boxplot.png
vignettes/images/3_4_vc_boxplot.png
vignettes/images/3_5_download_report.png
vignettes/images/3_6_drm.png
vignettes/r_lib.Rmd
vignettes/run_your_own_app.Rmd
vignettes/shiny_app.Rmd
vignettes/web_app.Rmd
