Man pages for PhilPalmer/AutoPlate
AutoPlate
| assay_to_plate_df | Assay to plate dataframe |
| assay_to_prism_df | Assay to PRISM dataframe |
| autoplate-package | autoplate: AutoPlate |
| calc_neut | Calculate neutralisation |
| dilutions_ella | Default dilutions ELLA data |
| dilutions_pmn | Default dilutions pMN data |
| ella_to_assay_df | ELLA to assay dataframe |
| example_data_column_descriptions | Example data column descriptions |
| example_data_pmn_platelist_H1N1 | pMN Platelist H1N1 Example Data |
| example_data_pmn_plate_n1 | pMN Plate 1 Example Data |
| exclude_wells | Exclude wells |
| init_assay_df | Initialise assay dataframe |
| init_av_lum_df | Initialise average luminescence dataframe |
| init_cols | Init cols |
| init_sample | Init sample ID |
| init_samples | Init samples |
| init_title | Initialise title |
| init_types | Init types |
| init_types_boxplot | Initialise types boxplot |
| plot_cv_boxplot | Plot cell-virus boxplot |
| plot_data_exploration | Plot data exploration |
| plot_drc | Plot DRC |
| plot_heatmap | Plot heatmap |
| plot_ic50_boxplot | Plot IC50 boxplot |
| read_plus | Read plus |
| replace_names | Replace names |
| run_app | Run the Shiny Application |
| update_cols_order | Update treatments colours and order |
| update_col_types | Update column types |
| update_dilutions | Update dilutions |
| update_feature_plate | Update types |
| update_sample_ids | Update sample_ids |
