API for QianlJun/scCRISPR
Pipeline of single-cell crispr screen analysis
| Global functions | |
|---|---|
| call_matchlist | Source code |
| call_result_map | Source code |
| call_result_unmap | Source code |
| cells_need | Source code |
| convert_to_gr | Source code Source code |
| filter_result | Source code |
| get_lower_tri | Source code |
| get_upper_tri | Source code |
| load_bam | Source code |
| plot_cor | Source code |
| plot_effectsize | Source code |
| plot_geneffect | Source code |
| plot_heatmap | Source code |
| plot_ldr | Source code |
| plot_pca | Source code |
| reorder_cormat | Source code |
| run_GO | Source code |
| run_GSEA | Source code |
| run_KEGG | Source code |
| run_grnboost2 | Source code |
| run_scenic | Source code |
| sgRNA_annotate | Source code |
| sgRNA_annotation_org | Source code |
| sgRNA_count | Source code |
| sgRNA_count_unmap | Source code |
| sgRNA_detect | Source code |
| sgRNA_funceval | Source code |
| sgRNA_percent | Source code |
| sgRNA_search | Source code |
