Man pages for QiliShi/NetworkSim
Network Comparison Based on Structural Equivalence and Graphlets
| COAD.net | PPI networks of the ten samples with colon adenocarcinoma |
| databases.net | integrated PPI network |
| mnetODA | Calculate the pair-wise ODAs among networks |
| mnetSE | Calculate the paired structural equivalences among networks |
| netGDD | Calculate the Graphlet degree distribution (GDD) agreement... |
| netODA | Calculate the orbit distribution agreement (ODA) between two... |
| netSE | Calculate the structural equivalence between two networks |
| netSEs | Calculate the structural equivalence of paired nodes |
| nodesCom | Get the paired nodes which shared neighbors from two networks |
| subnet | Subnetwork from a network |
| TCGA_A6_2686.Muts | Mutated genes in the sample TCGA_A6_2686 |
| TCGA_A6_2686.net | PPI network of the sample TCGA_A6_2686 |
| TCGA_AF_2687.Muts | Mutated genes in the sample TCGA_AF_2687 |
| TCGA_AF_2687.net | PPI network of the sample TCGA_AF_2687 |
