Man pages for RGLab/Import2ImmPort
Tools for preparing an ImmPort Data Submission
| checkByContext | Check a character vector against words in ImmuneSpace |
| checkSpelling | check for spelling errors in a character vector |
| checkTemplate | Check template data frame |
| demoData | demoData |
| findReplace | find and replace characters in a vector |
| geo2ImmPort | Output ImmPort-compliant tsv files for gene expression... |
| getIPLookups | retrieve colnames for an ImmPort Template with associated... |
| getIPLookupValues | retrieve allowed or preferred values for a given template and... |
| getTemplateDF | generate a template data frame for a given ImmPort Template... |
| getTemplateNames | get names of templates that can be retrieved via... |
| ImmPortLookups | ImmPortLookups |
| ImmPortTemplates | ImmPortTemplates |
| InteractiveFindReplace.df | Interactively find and replace problematic words in a data... |
| InteractiveFindReplace.vector | Interactively find and replace problematic words in a vector |
| interactiveSpellCheck.df | Interactively check spelling against dictionary and... |
| interactiveSpellCheck.vector | Interactively check spelling against dictionary and... |
| ISFreqsAll | ISFreqsAll |
| ISFreqsByNm | ISFreqsByNm |
| parseBSD | parse the basic study design template and return a list of R... |
| transform_basicStudyDesign | Transform R dataframes into ImmPort basicStudyDesign.csv... |
| transform_Data | Transform R dataframe into ImmPort csv format for non-Basic... |
| write_txt | Write a list of blocks to a text file |
