Files in RemyNicolle/CoRegNet-dev
CoRegNet : reconstruction and integrated analysis of co-regulatory
networks
DESCRIPTION
NAMESPACE
R/classes.R
R/coRegnet.R
R/display.R
R/evidences.R
R/masterRegulators.R
R/netInference.R
README.md
data/CHEA_sub.RData
data/CIT_BLCA_CNV.RData
data/CIT_BLCA_EXP.RData
data/CIT_BLCA_Subgroup.RData
data/ENCODE_sub.RData
data/HIPPIE_sub.RData
data/HumanTF.RData
data/HumanTF_entrezgene.RData
data/STRING_sub.RData
data/datalist
inst/CITATION
inst/unitTests/test_coregnet.R
inst/www/css/style.css
inst/www/js/cy.js
inst/www/js/cytoscape.min.js
inst/www/js/jquery-1.11.1.min.js
inst/www/js/jquery-slick/css/dcslick.css
inst/www/js/jquery-slick/index.html
inst/www/js/jquery-slick/js/jquery.slick.2.1.js
man/CoRegNet-class.Rd
man/HumanDataExamples.Rd
man/HumanTF.Rd
man/addEvidences.Rd
man/coRegnet-package.Rd
man/coregnet.Rd
man/coregulators.Rd
man/discretizeExpressionData.Rd
man/display.Rd
man/hLICORN.Rd
man/masterRegulator.Rd
man/refine.Rd
man/regulatorInfluence.Rd
man/regulators.Rd
man/summary.Rd
src/comblicorn.c
tests/runTests.R
vignettes/.Rhistory
vignettes/CoRegNet.Rmd
vignettes/CoRegNet.html
vignettes/fig/InfluenceHeatmap.png
vignettes/fig/PPARGLocalView.png
vignettes/fig/basal1.png
vignettes/fig/coregnetWithEvidence.png
vignettes/fig/luminal1.png
vignettes/fig/wholeApp.png
