.Rbuildignore
.gitignore
Community Size Analyses/.gitignore
Community Size Analyses/Community Size Analyses.Rmd
Community Size Analyses/Community-Size-Analyses.md
Community Size Analyses/Community-Size-Analyses_cache/.gitignore
Community Size Analyses/Community-Size-Analyses_cache/html/__packages
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_d617405223dd10b65015bc969a69a4d2.RData
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_d617405223dd10b65015bc969a69a4d2.rdb
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_d617405223dd10b65015bc969a69a4d2.rdx
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_non_pr_69d6ff448716dd79bec9da7d6f459963.RData
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_non_pr_69d6ff448716dd79bec9da7d6f459963.rdb
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_non_pr_69d6ff448716dd79bec9da7d6f459963.rdx
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_pr_e074210232c91066d4c01d97ea879d22.RData
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_pr_e074210232c91066d4c01d97ea879d22.rdb
Community Size Analyses/Community-Size-Analyses_cache/html/pw_ab_pr_e074210232c91066d4c01d97ea879d22.rdx
Community Size Analyses/Community-Size-Analyses_cache/html/running_ab_06f9d83fca76f27592b01f834b3fc3c3.RData
Community Size Analyses/Community-Size-Analyses_cache/html/running_ab_06f9d83fca76f27592b01f834b3fc3c3.rdb
Community Size Analyses/Community-Size-Analyses_cache/html/running_ab_06f9d83fca76f27592b01f834b3fc3c3.rdx
Community Size Analyses/Community-Size-Analyses_cache/html/running_ab_pr_4d91d7efb8692ab4db2c18ebe6a00e14.RData
Community Size Analyses/Community-Size-Analyses_cache/html/running_ab_pr_4d91d7efb8692ab4db2c18ebe6a00e14.rdb
Community Size Analyses/Community-Size-Analyses_cache/html/running_ab_pr_4d91d7efb8692ab4db2c18ebe6a00e14.rdx
Community Size Analyses/Community-Size-Analyses_cache/html/running_pr_ab_72adbf730b4ce6a0628a6ded5cb8bc08.RData
Community Size Analyses/Community-Size-Analyses_cache/html/running_pr_ab_72adbf730b4ce6a0628a6ded5cb8bc08.rdb
Community Size Analyses/Community-Size-Analyses_cache/html/running_pr_ab_72adbf730b4ce6a0628a6ded5cb8bc08.rdx
Community Size Analyses/Community-Size-Analyses_cache/latex/__packages
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_19433e62220946bbbca8f29712aad955.RData
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_19433e62220946bbbca8f29712aad955.rdb
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_19433e62220946bbbca8f29712aad955.rdx
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_non_pr_0fe9236398c0ea0bb984f8b54f47fce7.RData
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_non_pr_0fe9236398c0ea0bb984f8b54f47fce7.rdb
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_non_pr_0fe9236398c0ea0bb984f8b54f47fce7.rdx
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_pr_4c8a422bd24bdc9b3b6df18b61ddfab5.RData
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_pr_4c8a422bd24bdc9b3b6df18b61ddfab5.rdb
Community Size Analyses/Community-Size-Analyses_cache/latex/pw_ab_pr_4c8a422bd24bdc9b3b6df18b61ddfab5.rdx
Community Size Analyses/Community-Size-Analyses_cache/latex/running_ab_a78fb008532a9520beb5cba0e8b4b5ed.RData
Community Size Analyses/Community-Size-Analyses_cache/latex/running_ab_a78fb008532a9520beb5cba0e8b4b5ed.rdb
Community Size Analyses/Community-Size-Analyses_cache/latex/running_ab_a78fb008532a9520beb5cba0e8b4b5ed.rdx
Community Size Analyses/Community-Size-Analyses_cache/latex/running_ab_pr_912918fc26c3bebfacc24496fd763ed3.RData
Community Size Analyses/Community-Size-Analyses_cache/latex/running_ab_pr_912918fc26c3bebfacc24496fd763ed3.rdb
Community Size Analyses/Community-Size-Analyses_cache/latex/running_ab_pr_912918fc26c3bebfacc24496fd763ed3.rdx
Community Size Analyses/Community-Size-Analyses_cache/latex/running_pr_ab_5f71e7d622e1999d0ed6bd74ff270b54.RData
Community Size Analyses/Community-Size-Analyses_cache/latex/running_pr_ab_5f71e7d622e1999d0ed6bd74ff270b54.rdb
Community Size Analyses/Community-Size-Analyses_cache/latex/running_pr_ab_5f71e7d622e1999d0ed6bd74ff270b54.rdx
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/Plot_ab_non_pr-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/Plotting_ab_pr-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/barplot1-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/barplot2-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/checking_distribution-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/checking_distribution-2.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/checking_distribution-3.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/plotting_ab-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-1-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-2-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-3-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-4-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-5-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-6-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-7-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-8-1.png
Community Size Analyses/Community-Size-Analyses_files/figure-gfm/unnamed-chunk-9-1.png
Community Variability Analyses/.gitignore
Community Variability Analyses/Community Variability Analyses.Rmd
Community Variability Analyses/Community-Variability-Analyses.md
Community Variability Analyses/Community-Variability-Analyses_cache/gfm/__packages
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking distribution SS1-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking distribution SS1-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking distribution SS1-3.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking distribution-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking distribution-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking distribution-3.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking_distribution-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking_distribution-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking_distribution-3.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking_distribution-4.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking_distribution-5.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/checking_distribution-6.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/plot_deviation-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/plot_env-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/plot_expected-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/plot_observed-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-1-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-1-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-1-3.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-10-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-10-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-13-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-13-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-14-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-16-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-16-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-17-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-17-2.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-2-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-3-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-4-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-5-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-6-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-7-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-8-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-9-1.png
Community Variability Analyses/Community-Variability-Analyses_files/figure-gfm/unnamed-chunk-9-2.png
DESCRIPTION
LICENSE
LICENSE.md
Local Richness Analyses/.gitignore
Local Richness Analyses/Local Richness Analyses.Rmd
Local Richness Analyses/Local-Richness-Analyses.md
Local Richness Analyses/Local-Richness-Analyses_files/figure-gfm/checking_distribution-1.png
Local Richness Analyses/Local-Richness-Analyses_files/figure-gfm/checking_distribution-2.png
Local Richness Analyses/Local-Richness-Analyses_files/figure-gfm/checking_distribution-3.png
Local Richness Analyses/Local-Richness-Analyses_files/figure-gfm/unnamed-chunk-2-1.png
Local Richness Analyses/Local-Richness-Analyses_files/figure-gfm/unnamed-chunk-3-1.png
Local Richness Analyses/Local-Richness-Analyses_files/figure-gfm/unnamed-chunk-4-1.png
NAMESPACE
PredatorIsolationStochasticity.Rproj
R/beta_deviation_function.R
R/beta_deviation_siqueira_et_al_2019_function.R
R/data.R
R/null_assembly_function.R
README.Rmd
README.md
Treatment Richness Analyses/.gitignore
Treatment Richness Analyses/Treatment Richness.Rmd
Treatment Richness Analyses/Treatment-Richness.md
Treatment Richness Analyses/Treatment-Richness_files/figure-gfm/4-1.png
Treatment Richness Analyses/Treatment-Richness_files/figure-gfm/6-1.png
Treatment Richness Analyses/Treatment-Richness_files/figure-gfm/8-1.png
csv data/community_data.csv
csv data/environmental_data.csv
csv data/metadata.txt
csv data/trait_data.csv
data/All.rda
data/ID_SS2_SS3.rda
data/SS_SS2_SS3.rda
data/Trait_SS1.rda
data/Trait_SS2.rda
data/Trait_SS2_SS3.rda
data/Trait_SS3.rda
data/com_SS1.rda
data/com_SS1_non_predators.rda
data/com_SS1_predators.rda
data/com_SS2.rda
data/com_SS2_SS3.rda
data/com_SS2_SS3_abundance.rda
data/com_SS2_SS3_non_predators.rda
data/com_SS2_SS3_non_predators_abundance.rda
data/com_SS2_SS3_non_predators_richness.rda
data/com_SS2_SS3_predators.rda
data/com_SS2_SS3_predators_abundance.rda
data/com_SS2_SS3_predators_richness.rda
data/com_SS2_SS3_richness.rda
data/com_SS2_non_predators.rda
data/com_SS2_predators.rda
data/com_SS3.rda
data/com_SS3_non_predators.rda
data/com_SS3_predators.rda
data/env_data_SS1.rda
data/env_data_SS2.rda
data/env_data_SS2_SS3.rda
data/env_data_SS3.rda
data/env_data_all.rda
data/fish_SS1.rda
data/fish_SS2.rda
data/fish_SS2_SS3.rda
data/fish_SS3.rda
data/fish_isolation_SS1.rda
data/fish_isolation_SS2.rda
data/fish_isolation_SS3.rda
data/isolation_SS1.rda
data/isolation_SS2.rda
data/isolation_SS2_SS3.rda
data/isolation_SS3.rda
man/All.Rd
man/ID_SS2_SS3.Rd
man/SS_SS2_SS3.Rd
man/Trait_SS1.Rd
man/Trait_SS2.Rd
man/Trait_SS2_SS3.Rd
man/Trait_SS3.Rd
man/beta_deviation.Rd
man/beta_deviation_siqueira_et_al_2019.Rd
man/com_SS1.Rd
man/com_SS1_non_predators.Rd
man/com_SS1_predators.Rd
man/com_SS2.Rd
man/com_SS2_SS3.Rd
man/com_SS2_SS3_abundance.Rd
man/com_SS2_SS3_non_predators.Rd
man/com_SS2_SS3_non_predators_abundance.Rd
man/com_SS2_SS3_non_predators_richness.Rd
man/com_SS2_SS3_predators.Rd
man/com_SS2_SS3_predators_abundance.Rd
man/com_SS2_SS3_predators_richness.Rd
man/com_SS2_SS3_richness.Rd
man/com_SS2_non_predators.Rd
man/com_SS2_predators.Rd
man/com_SS3.Rd
man/com_SS3_non_predators.Rd
man/com_SS3_predators.Rd
man/env_data_SS1.Rd
man/env_data_SS2.Rd
man/env_data_SS2_SS3.Rd
man/env_data_SS3.Rd
man/env_data_all.Rd
man/fish_SS1.Rd
man/fish_SS2.Rd
man/fish_SS2_SS3.Rd
man/fish_SS3.Rd
man/fish_isolation_SS1.Rd
man/fish_isolation_SS2.Rd
man/fish_isolation_SS3.Rd
man/isolation_SS1.Rd
man/isolation_SS2.Rd
man/isolation_SS2_SS3.Rd
man/isolation_SS3.Rd
man/null_assembly.Rd