Man pages for SHUD-System/SHUDtoolbox
Toolbox For SHUD Model System

AddHoleToPolygonAdd holes into Polygons 'AddHoleToPolygon'
AerodynamicResistanceAerodynamic Resistance. Eq 4.2.25 in David R Maidment,...
AirDensityAir Density, Eq 4.2.4 in David R Maidment, Handbook of...
autoBuildModelAutomatically run SHUDgis based on the input data and...
BasicPlotRead multiply SHUD model output files and do time-series plot
BCGenerate the default Boundary Condition 'BC'
BulkSurfaceResistanceBulk Surface Resistance, Eq 4.2.22 in David R Maidment,...
CanopyResistanceCanopy resistance 'CanopyResistance'
CommonPointsFind the common coordinates in two groups of coordinates.
compareMapsPlot multiple maps 'compareMaps'
correctRiverSlopeConvert the bed slope of river, to avoid negative/zero slope...
countCount the frequency of numbers 'count'
crs.AlbersBuild an Albers Equal Area projection based on the spatial...
crs.LambertBuild a Lambert Equal Area projection based on the spatial...
crs.long2utmGet UTM projection parameters in CRS, from longtitude and...
crs.long2utmZoneGet UTM zone frome longitutde 'crs.long2utmZone'
datafilter.rivFilter the river data with a filter 'datafilter.riv'
days_in_yearNumber of days in years.
DeltaSCalculate the Change of Storage. 'DeltaS'
dot-shudThis is .shud environment.
EudistEudilic Distance 'Eudist'
extractCoordsextract Coordinates of SpatialLines or SpatialPolygons...
extractRasterExtract values on Raster map. The line is a straight line...
fdcDefault Comparison of the observation and simulation 'fdc'
fishnetGeneratue fishnet 'fishnet' Generate fishnet by the...
ForcingCoverageGenerate the coverage map for forcing sites....
FromToNodereturn the FROM and TO nodes index of the SpatialLines...
getAquiferDepthCalculate the AquiferDepth of mesh cells 'getAquiferDepth'
getAreaCalculate the area of the cells 'getArea'
getCentroidGet the centroids of the cells 'getCentroid'
getElevationCalculate the elevation of mesh cells 'getElevation'
getLakeEleIDGet the Lake Element Index 'getLakeEleID'
getOutletsGet outlet ID(s) 'getOutlets'
getRiverNodesGet the From/To nodes of the river. 'getRiverNodes'
getVertexCalculate the Vertex of the cells 'getVertex'
grid.subsetFind the subset of a extent in a grid. 'grid.subset'
highlight_idHighlight elements with id. 'highlight_id'
hydrographPlot hydrograph 'hydrograph'
LAI2hcCalculate vegetation height from Leaf Area Index (LAI), Eq...
LaiRf.GLCGenerate the default LAI and Roughness Length for USGS GLC...
LaiRf.NLCDGenerate the default LAI and Roughness Length 'LaiRf.NLCD'
LatentHeatLatent Heat, Eq 4.2.1 in David R Maidment, Handbook of...
lc_EQconvert equation from Univeristy of Marryland classes to NLCD...
lc.GLCThe default land cover parameters from USGS GLC 'lc.GLC'
lc.NLCDGenerate the default land cover parameters of NLCD classes....
lc.UMDThe default land cover parameters from UMD 'lc.UMD'
LineFitLinefit the observation and simulation 'LineFit'
loaddataRead multiply SHUD model output files
map2dRaster plot the mesh data 'map2d'
MeltFactorGenerate the default melt factor 'MeltFactor'
MeshAttSummary of the attributions on Mesh 'MeshAtt'
MeshData2RasterSpatialData to Raster 'MeshData2Raster'
meshSinksGet the Sink cells in SHUD mesh 'meshSinks'
ModelInfoSummary of the basic information of model input data....
NLCD.colorsReturn NLCD colors. 'NLCD.colors'
NLCD.namesReturn NLCD class names. 'NLCD.names'
NodeIDListreturn the Index of nodes in SpatialData 'NodeIDList'
PET_PMPotential Evapotranspiration with Pennmann-Monteith equation....
plot_animatePlot animation maps 'plot.animate'
plot_spPlot SpatialPolygons maps 'plot.sp'
plot_tsdPlot xts data.. 'plot_tsd'
png.controlPrepare png figure out. 'png.control'
PointInDistanceFind the points in distance less than tol. 'PointInDistance'
polygonAreaCalculate the Polygon Area;
PressureElevationAir pressure at the elevation, Allen(1998) Eq(7)...
ProjectCoordinateRe-project coordinates betwen GCS and PCS 'ProjectCoordinate'
PsychrometricConstantPsychrometric Constant, Eq 4.2.1 in David R Maidment,...
PTFPedotransfer function to generate soil/geol parameter from...
PTF.geolPedotransfer function to generate soil parameter 'PTF.geol'
PTF.soilPedotransfer function to generate soil parameter 'PTF.soil'
QvsODefault Comparison of the observation and simulation 'QvsO'
rcpp_hello_worldSimple function using Rcpp
readattRead the .att file 'readmesh'
readcalibRead the .calib file 'readcalib'
readconfigRead the configuration (.para, .calib) file 'readconfig'
read.dfRead the matrix or data.frame file which has (nrow, ncol) in...
readforc.csvRead the .csv files in .forc file 'readforc.csv'
readforc.fnRead the .forc file 'readlc'
readgeolRead the .geol file 'readgeol'
readicRead the .ic file 'readic'
readlaiRead the .ts.lai Time-Series file 'readlai'
readlcRead the .lc file 'readlc'
readmeshRead the .mesh file 'readmesh'
readncRead the time tage from NC file.
readnc.timeRead the time tage from NC file.
readoutRead output file from SHUD model
readout.headerRead header information of output file
readparaRead the .para file 'readpara'
readrivRead the .riv file 'readriv'
readrivsegRead the .rivseg file 'readrivseg'
readriv.spRead the river shapefile 'readriv.sp'
readsoilRead the .soil file 'readsoil'
read.tsdRead the time-series file, which has c(nrow, ncol,...
removeholesRemove the holes in polygons 'removeholes'
RiverAttSummary of the attributions on Rivers 'RiverAtt'
RiverLengthCalculate the river length 'RiverLength'
RiverSlopeCalculate the river slope 'RiverSlope'
RiverTypeparameters for river types 'RiverType'
rmDuplicatedLinesRemove the duplicated lines, which means the FROM and TO...
rowMatchIdentify whether every row of x is same as m;
sacThis is data of one of sub-catchmetn in Sacramento Watershed...
shThis is data to be included in my package
SharedPointsFind Shared points in SpatialLine* 'SharedPoints'
shud.attextract Coordinates of SpatialLines or SpatialPolygons...
shud.calibGenerate the default model calibration 'shud.calib'
shud.envSetup .shud environment. 'shud.env'
shud.fileinPrepare Input file of SHUD model 'shud.filein'
shud.icextract Coordinates of SpatialLines or SpatialPolygons...
shud.maskGenerate the raster mask of Mesh domain 'shud.mask'
shud.meshGenerate the mesh data from the triangulation 'shud.mesh'
shud.paraGenerate the default model configuration 'shud.para'
shud.rivercalculate river order, downstream, slope and length...
SHUD-River-classClass of SHUD.RIVER 'SHUD.RIVER'
shud.rivsegGenerate the river segments table 'shud.rivseg'
SHUDtoolbox-packageA short title line describing what the package does
shud.triangleGenerate triangle mesh domain 'shud.triangle'
SimpleSpatialSimplify SpatialData.
SimplifybyLenSimplify Polylines by length 'SimplifybyLen'
SinglePolygonConver the MULTIPOLYGONS to SINGLEPOLYGONS.
SlopeSatVaporPressureSlope of saturated vapor pressure, Eq 4.2.3 in David R...
sp2PSLGConvert SpatialLines or SpatialPolygons a Planar Straight...
sp2rasterSpatialData to Raster 'sp2raster'
sp.CutSptialLinesCut sptialLines with threshold. 'sp.CutSptialLines'
sp.mesh2ShapeConvert the .mesh file to shapefile. 'sp.mesh2Shape'
sp.riv2shpConvert the SHUD.RIVER class to SpatialLines 'sp.riv2shp'
sp.RiverDowndetermine index of downstream 'sp.RiverOrder'
sp.RiverOrdercalculate river order 'sp.RiverOrder'
sp.RiverPathdetermine River path, disolve the river network based on...
sp.RiverSegCut the river by shud.mesh 'sp.RiverSeg'
sp.simplifyLenSimplify Polylines by length 'sp.simplifyLen'
sp.Tri2ShapeGenerate triangle mesh domain 'sp.Tri2Shape'
sunapeeThis is data of Lake Sunappe to be included in my package
toCentroidFind the centroid of the triangles 'toCentroid'
Tri2CentroidCentroids of the triangulation 'Tri2Centroid'
triTopologyDetermine the topological relation among triangles.
ts2DailyConvert the time-series data to daily data.
ts2dfConvert Time-Series data to data.frame 'ts2df'
ts2mapPlot map of time-series data 'ts2map'
tsLaiRfGenerate the default LAI and Roughness Length for UMD...
Untructure-Domain-classClass of SHUD.MESH 'SHUD.MESH'
VaporPressure_ActActual vapor pressure 'VaporPressure_Act'
VaporPressure_SatSaturated vapor pressure, Eq 4.2.2 in David R Maidment,...
voronoipolygonsGenerate Thiesson Polygons from a point data...
watershedDelineationDo Watershed Delineation 'watershedDelineation'
wb.allCalculate the water balance 'wb.all'
wb.DSCalculate the Change of Storage. 'wb.DS'
wb.eleCalculate the water balance 'wb.ele'
wb.lakeCalculate the Change of Storage. 'wb.lake'
wb.rivCalculate the water balance 'wb.riv'
which_outliersFind the outliers in a dataset 'which_outliers'
WindProfileCalculate windspeed at Zx heights. 'WindProfile'
write.configWrite SHUD configuration files (.para, .calib, etc.)
write.dfWrite data.frame out into file 'write.df'
write.forcWrite SHUD .forc file 'write.forc'
write.icWrite SHUD .ic file 'writeinit'
write.meshWrite .mesh file 'write.mesh'
write.rivWrite SHUD .mesh file 'writemesh'
writeshapeWrite ESRI shapefile out 'writeshape'
write.tsdWrite xts data out into file 'write.tsd'
write.xtsWrite xts data out into file 'write.xts'
xy2IDConvert the 'xy' (X,Y) into Index in 'coords' 'xy2ID'
xy2shpGenerate a shapefile from coordinates. 'xy2shp'
xyz2RasterRead the time tage from (x, y, matrix).
SHUD-System/SHUDtoolbox documentation built on Nov. 27, 2024, 5:54 a.m.