Man pages for Sage-Bionetworks/agoradataprocessing
Process Data from Synapse for AMP-AD Agora
| get_brain_expression_data | Get brain expression data |
| get_druggability_data | Get druggability data from Synapse |
| get_eqtl | Load eQTL data from Synapse |
| get_gene_info_table | Load gene info data from Synapse |
| get_igap | Load iGAP data from Synapse |
| get_median_expression_data | Get median expression data |
| get_network_data | Get network data from Synapse |
| get_rnaseq_diff_expr_data | Get rnaseq differential expression data from Synapse |
| get_studies_table | Load study information from Synapse |
| get_target_list | Load target list from Synapse |
| get_team_info | Load team info from Synapse |
| get_team_member_info | Load team member info from Synapse |
| get_tissues_table | Load tissue information from Synapse |
| pipe | Pipe operator |
| process_brain_expression_data | Process brain expression data |
| process_druggability_data | Process druggability data |
| process_eqtl | Process eQTL data |
| process_igap | Add iGAP boolean to gene info table |
| process_median_expression_data | Process median expression data |
| process_network_data | Process rnaseq diff expr data |
| process_rnaseq_diff_expr_data | Process rnaseq diff expr data |
| process_target_list | Process the target list by getting specific columns,... |
| process_team | Process team info by joining with team member info. |
