Man pages for Sage-Bionetworks/cleanAD
Curator Tools for Cleaning AD Knowledge Portal Data

add_missing_specimensAdd missing specimenID rows
child_namesPull out names of children
clean_json_stringRemove JSON From Multi-annotations
gather_ids_all_studiesGather IDs from metadata files
gather_metadata_synIDs_allGather Metadata synIDs
gather_study_metadata_synIDsGather Metadata synIDs By Study
get_configGet config
get_file_dataGet File Data
get_file_indicesGet Indices for All Metadata File Types
join_full_study_metadataJoin study metadata set
simple_table_queryGet Simple Table Query
update_samples_tableUpdate sample ID table
update_task_annotationUpdate task annotation
upload_log_fileUpload the log file to Synapse
Sage-Bionetworks/cleanAD documentation built on Dec. 9, 2024, 3:40 p.m.