Files in Sage-Bionetworks/dten
Infers drugs of interest based on expression
.Rbuildignore
.gitignore
DESCRIPTION
Dockerfile
LICENSE
NAMESPACE
R/dten.R
R/dtex.R
R/metaviper.R
R/pcsf.R
README.md
analysis/addingDrugsToPPI.R
analysis/drugRankInCellLines.R
analysis/expressionVsProteinActivity.R
bin/evalNetworkResults.R
bin/metaNetworkComparisons.R
bin/networksToSynapse.R
bin/runMetaViper.R
bin/runNetworkFromGenes.R
bin/subSampleTumorTypes.R
bin/testTab.R
cwl/README.md
cwl/build-store-networks-with-params.cwl
cwl/dten-test.yml
cwl/dten-tissue.yml
cwl/network-and-store.cwl
cwl/run-dten-from-query-list.cwl
cwl/run-dten-from-table.cwl
cwl/run-dten.cwl
cwl/run-nf2.yml
cwl/sample-dten-from-fv.cwl
cwl/steps/get-mv-samples.cwl
cwl/steps/make-net-name.cwl
cwl/steps/proteins-from-genes.cwl
cwl/steps/run-meta-analysis.cwl
cwl/steps/run-network-with-params.cwl
cwl/steps/store-tables.cwl
cwl/tcga-sample.yml
cwl/tcga-unique.yml
inst/README.md
man/buildNetwork.Rd
man/getAllNetStats.Rd
man/getDrugIds.Rd
man/getDrugNames.Rd
man/getDrugNodes.Rd
man/getDrugTargets.Rd
man/getDrugs.Rd
man/getDrugsFromGraph.Rd
man/getViperForCondition.Rd
man/loadDrugGraph.Rd
man/renameDrugIds.Rd
man/runPcsfWithParams.Rd
man/shuffleTerminalsAndRun.Rd
