| array2ade4 | Converts microarray input data into a data frame suitable for... |
| bet.coinertia | Between class coinertia analysis |
| between.graph | Plot 1D graph of results from between group analysis |
| bga | Between group analysis |
| bga.jackknife | Jackknife between group analysis |
| bga.suppl | Between group analysis with supplementary data projection |
| checkfac | Check factor |
| chime3D | Produce web graph of 3D graph that can be viewed using Chime... |
| cia | Coinertia analysis: Explore the covariance between two... |
| commonMap | Highlight common points between two 1D plots |
| comparelists | Return the intersect, difference and union between 2 vectors |
| do3d | Generate 3D graph(s) using scatterplot3d |
| dudi.rwcoa | Row weighted Correspondence Analysis |
| forrwcoa | Row weighted Correspondence Analysis |
| genes | Returns an index of the top N variables at the ends of the x... |
| genes1d | genes1d: list top N variables on one axis. Lists the maximum... |
| getcol | Specialised colour palette with set of 21 maximally... |
| getdata | Check dataset |
| graph1D | Plot 1D graph of axis from multivariate analysis |
| heatplot | Draws heatmap with dendrograms. |
| html3D | Produce web page with a 3D graph that can be viewed using... |
| jmol3D | Produce web graph of 3D graph that can be viewed using Jmol... |
| khan | Microarray gene expression dataset from Khan et al., 2001.... |
| NCI60 | Microarray gene expression profiles of the NCI 60 cell lines |
| ord | Ordination |
| overview | Draw boxplot, histogram and hierarchical tree of gene... |
| plotarrays | Graph xy plot of variable (array) projections from... |
| plotgenes | Graph xy plot of variable (gene) projections from PCA or COA.... |
| prettyDend | Draw hierarchical tree of gene expression data with a... |
| randomiser | Randomly reassign training and test samples |
| sumstats | Summary statistics on xy co-ordinates, returns the slopes and... |
| suppl | Projection of supplementary data onto axes from a between... |
| s.var | Draw xy plots of results of multivariate analysis |
| topgenes | Topgenes, returns a list of variables at the ends (positive,... |
