Man pages for Senbee/Sequgio
Isoform expression estimation based on RNA-seq data
| allCounts | Region (exons and junctions) counts |
| Design | Design matrices |
| doCounts-methods | ~~ Methods for Function 'doCounts' in Package 'Sequgio' ~~ |
| fitModels | Fit a Poisson model for expression and read distribution... |
| getCounts-methods | Extract read counts |
| makeXmatrix | Create design matrix |
| resetCounts-methods | ~~ Methods for Function 'resetCounts' in Package 'Sequgio' ~~ |
| reshapeTxDb | Reshape a TranscriptDb object with additional information |
| setCounts-methods | Create a container for read counts, a bigmatrix instance. |
| txdb | Reshaped TranscriptDb annotation object |
