Files in ShixiangWang/coco
Interactive Cancer Explorer
.Rbuildignore
.gitattributes
.gitignore
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/app_config.R
R/app_server.R
R/app_ui.R
R/coco-package.R
R/cohort.R
R/constants.R
R/database.R
R/dataset.R
R/golem_utils_server.R
R/golem_utils_ui.R
R/logging.R
R/run_app.R
R/utils_database.R
R/zzz.R
README.Rmd
coco.Rproj
data-raw/example_gdc_laml.R
data-raw/example_laml.R
dev/01_start.R
dev/02_dev.R
dev/03_deploy.R
dev/run_dev.R
inst/WORDLIST
inst/app/www/coco.css
inst/app/www/db.css
inst/app/www/favicon.png
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_MAF.gz
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_MAF.gz.Hugo_Symbol.rowidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_MAF.gz.Tumor_Sample_Barcode.rowidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_MAF.gz.colidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_gene_expr_HTSeq_count.tsv.gz
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_gene_expr_HTSeq_count.tsv.gz.colidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_gene_expr_HTSeq_count.tsv.gz.rowidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_patient_info.tsv
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_patient_info.tsv.colidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_patient_info.tsv.rowidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_somatic_CNV.segment.gz
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_somatic_CNV.segment.gz.colidx
inst/cohorts/example_TCGA_LAML/example_TCGA_LAML_somatic_CNV.segment.gz.rowidx
inst/cohorts/example_TCGA_LAML/meta.yml
inst/golem-config.yml
inst/mem.R
man/SPEC_DATASET_OPTIONS.Rd
man/SPEC_ROWINDEX.Rd
man/SPEC_SAMPINDEX.Rd
man/app_sys.Rd
man/coco-package.Rd
man/cohorts.Rd
man/database.Rd
man/datasets.Rd
man/get_golem_config.Rd
man/run_app.Rd
sync.sh
tests/spelling.R
tests/testthat.R
tests/testthat/test-golem-recommended.R
tests/testthat/test-golem_utils_server.R
tests/testthat/test-golem_utils_ui.R
