API for ShixiangWang/sigminer.helper
Explore, Analyze and Visualize Catalogs and Patterns of Copy Number Variation in Cancer Genomics
| Global functions | |
|---|---|
| %>% | Man page |
| CNVMotif | Man page |
| CNVMotif-package | Man page |
| LCS | Source code |
| LCSMatrix | Source code |
| build_sub_matrix | Man page Source code |
| chunk2 | Source code |
| cluster_pam | Man page Source code |
| cluster_pam_estimate | Man page Source code |
| cluster_split | Man page Source code |
| col2hex | Source code |
| collapse_local_seqs | Source code |
| collapse_shift_seqs | Source code |
| collapse_shift_seqs2 | Source code |
| do_msa | Man page Source code |
| extract_seqs | Man page Source code |
| geom_logo2 | Man page Source code |
| getLocalSubstr | Source code |
| getScoreMatrix | Source code |
| getScoreMatrixRect | Source code |
| get_fun | Source code |
| get_score_matrix | Man page Source code |
| ggseqlogo2 | Man page Source code |
| logo_data2 | Source code |
| msaClustalWCustom | Source code |
| pairScoreMatrix | Source code |
| pairScoreSimpleMatrix | Source code |
| pairScoreSimpleVector | Source code |
| pairScoreVector | Source code |
| rgb2hex | Source code |
| seg_data | Source code |
| show_seq_logo | Man page Source code |
| show_seq_shape | Man page Source code |
| transform_seqs | Man page Source code |
| vector_to_combination | Source code |
