Files in SineadMorris/ushr
Understanding Suppression of HIV
.Rbuildignore
.Rhistory
.gitignore
.travis.yml
CRAN-RELEASE
DESCRIPTION
LICENSE
ModelSchematic.png
NAMESPACE
NEWS.md
R/actg315_data.R
R/fitting_fns.R
R/fitting_fns_triphasic.R
R/get_TTS.R
R/get_model_output.R
R/globals.R
R/input_processing.R
R/master_fn.R
R/master_fn_triphasic.R
R/model_fns.R
R/output_processing.R
R/simulate_data.R
R/transformation_fns.R
README.Rmd
README.md
README_files/figure-markdown_github/TTSplot-1.png
README_files/figure-markdown_github/TTSplot-2.png
README_files/figure-markdown_github/bpfits-1.png
README_files/figure-markdown_github/plotdata-1.png
README_files/figure-markdown_github/spfits-1.png
cran-comments.md
data/actg315raw.RData
inst/CITATION
man/actg315raw.Rd
man/add_noise.Rd
man/biphasic_root.Rd
man/filter_data.Rd
man/filter_dataTTS.Rd
man/fit_model.Rd
man/fit_model_triphasic.Rd
man/get_CI.Rd
man/get_CItable.Rd
man/get_TTS.Rd
man/get_biphasic.Rd
man/get_curve.Rd
man/get_error.Rd
man/get_error_triphasic.Rd
man/get_nonparametricTTS.Rd
man/get_optim_fit.Rd
man/get_optim_fit_triphasic.Rd
man/get_parametricTTS.Rd
man/get_params.Rd
man/get_plottheme.Rd
man/get_singlephase.Rd
man/get_transformed_params.Rd
man/get_triphasic.Rd
man/plot_TTS.Rd
man/plot_data.Rd
man/plot_model.Rd
man/plot_pairs.Rd
man/remove_vl0.Rd
man/simulate_data.Rd
man/simulate_time.Rd
man/simulate_time_fixed.Rd
man/simulate_vl.Rd
man/single_root.Rd
man/summarize_model.Rd
man/switch_params.Rd
man/switch_simulated_params.Rd
man/transformVL.Rd
man/tri_switch_params.Rd
man/triphasic_root.Rd
man/ushr.Rd
man/ushr_triphasic.Rd
tests/testthat.R
tests/testthat/test-data.R
tests/testthat/test-filtering.R
tests/testthat/test-fitting.R
vignettes/HIV.bib
vignettes/Vignette.Rmd
