Man pages for SrivastavaLab/bwgbiomass
Generate Biomass From BWG Allometry Data
| add_missing_bwg_names | Add missing names |
| allometry | Download allometry data set |
| all_ostracods_adults | All ostracods adults |
| biomass | Download BWG biomass data set |
| calculate_biomass | Calculate biomass |
| clean_allometry_matrix | Clean allometry matrix |
| clean_lengths | Clean lengths |
| correct_size_categories | Correct size categories |
| correct_stages | Correct stages |
| create_allometry_matrix | Create the allometry matrix |
| create_biomass_table | Create the cleaned up biomass table |
| create_category_lookup | Create category lookup table |
| create_equation_bank | Create equation bank |
| filter_by_biomass_type | Filter by biomass type |
| filter_type | Filter by data type |
| fit_model | Fit model |
| fwdata_create | Create a new fwdata release |
| gen_biomass | Generate biomass estimates |
| generate_biomass_fun | Generate biomass function |
| generate_median_biomass | Generate median biomass |
| get_closest_relatives | Get closest relatives |
| get_median_species | Get median species |
| get_species_ids | Get Species IDs |
| interpolate_biomass | Interpolate biomass |
| obtain_biomass_table | Obtain original biomass table |
| obtain_summary_data | Obtain summary data |
| populate_biomass_table | Populate the biomass table |
| remove_file_col | Remove file column |
| remove_missing_biomass | Remove rows with no biomass |
| run_linear_models | Run linear models |
| sanity_check | Sanity check biomass measurements |
| select_category_cols | Select category cols |
| standardize_size_categories | Standardize size categories. |
| standardize_stages | Standardize developmental stage |
