Files in ThomasDCY/AdaLiftOver
Adaptive liftOver
.Rbuildignore
.Rhistory
.Rproj.user/F1B7D88C/cpp-definition-cache
.Rproj.user/F1B7D88C/pcs/debug-breakpoints.pper
.Rproj.user/F1B7D88C/pcs/files-pane.pper
.Rproj.user/F1B7D88C/pcs/source-pane.pper
.Rproj.user/F1B7D88C/pcs/windowlayoutstate.pper
.Rproj.user/F1B7D88C/pcs/workbench-pane.pper
.Rproj.user/F1B7D88C/persistent-state
.Rproj.user/F1B7D88C/rmd-outputs
.Rproj.user/F1B7D88C/saved_source_markers
.Rproj.user/F1B7D88C/sources/prop/0D51BA78
.Rproj.user/F1B7D88C/sources/prop/39FB4BFA
.Rproj.user/F1B7D88C/sources/prop/55E24579
.Rproj.user/F1B7D88C/sources/prop/633128D8
.Rproj.user/F1B7D88C/sources/prop/73D1B921
.Rproj.user/F1B7D88C/sources/prop/74E40836
.Rproj.user/F1B7D88C/sources/prop/791CF989
.Rproj.user/F1B7D88C/sources/prop/8E04F4C1
.Rproj.user/F1B7D88C/sources/prop/A0EC55BE
.Rproj.user/F1B7D88C/sources/prop/A11AAFB9
.Rproj.user/F1B7D88C/sources/prop/B9A3074F
.Rproj.user/F1B7D88C/sources/prop/DEEF0B6F
.Rproj.user/F1B7D88C/sources/prop/EF1E1EE4
.Rproj.user/F1B7D88C/sources/prop/INDEX
.Rproj.user/shared/notebooks/D6B3E8D7-AdaLiftOver/1/s/chunks.json
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitattributes
.gitignore
AdaLiftOver.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/adaptive_liftover.R
R/compute_similarity_epigenome.R
R/compute_similarity_grammar.R
R/gr_candidate_filter.R
R/training_module.R
README.md
data/data_example.RData
data/epigenome_hg38.RData
data/epigenome_mm10.RData
data/jaspar_pfm_list.RData
data/rat_example.RData
data/training_module_example.RData
man/adaptive_liftover.Rd
man/compute_similarity_epigenome.Rd
man/compute_similarity_epigenome_flat.Rd
man/compute_similarity_grammar.Rd
man/compute_similarity_grammar_flat.Rd
man/gr_candidate_filter.Rd
man/training_module.Rd
vignettes/.gitignore
vignettes/AdaLiftOver.Rmd
vignettes/labeling.png
