API for Timothy-Barry/ondisc
Algorithms and data structures for large single-cell expression matrices
| Global functions | |
|---|---|
| [,odm,ANY,missing,missing-method | Man page |
| add_row_names | Source code |
| add_value_to_vector | Source code |
| collapse_grna_counts | Source code |
| compute_cellwise_covariates | Source code |
| compute_n_ok_pairs_ondisc | Source code |
| compute_n_trt_cells_matrix_ondisc | Source code |
| compute_nt_nonzero_matrix_and_n_ok_pairs_ondisc | Source code |
| convert_pointer_to_index_vector_v2 | Source code |
| create_new_directory | Source code |
| create_odm | Source code |
| create_odm_from_cellranger | Man page Source code |
| create_odm_from_r_matrix | Man page Source code |
| create_odm_from_r_matrix_internal | Source code |
| create_odm_r_matrix_cpp | Source code |
| create_random_matrix | Source code |
| decrement_vector | Source code |
| dim,odm-method | Man page |
| dimnames,odm-method | Man page |
| expand_tilde | Source code |
| generate_batch | Source code |
| generate_gene_names | Source code |
| generate_grna_idx_to_vector_idx_map | Source code |
| get_mtx_metadata | Source code |
| init_ull_vect | Source code |
| initialize_cellwise_covariates | Source code |
| initialize_odm_from_backing_file | Man page Source code |
| initialize_odms | Source code |
| load_row_cpp | Source code |
| obtain_pointer_vector | Source code |
| ondisc | Man page |
| ondisc-package | Man page |
| preprare_output_covariate_dt | Source code |
| print_ull_vect | Source code |
| process_input_files_round_1 | Source code |
| process_input_files_round_2 | Source code |
| read_feature_ids | Source code |
| read_integer_vector | Source code |
| read_row_ptr | Source code |
| rownames | Man page |
| set_matrix_accessibility | Source code |
| threshold_count_matrix_cpp | Source code |
| update_dt_column | Source code |
| update_modality_names | Source code |
| update_n_features_vector | Source code |
| write_example_cellranger_dataset | Man page Source code |
| write_sceptre_object_to_cellranger_format | Source code |
| write_sceptre_object_to_cellranger_format_v2 | Source code |
| write_to_csr | Source code |
