TomKellyGenetics/bbknn: R implementation of the BBKNN package

Implements the Python bbknn module to be called in R. Enables batch effect correction using the BBKNN algorithm. Performs batch balanced k nearest neighbours. See the Python repository for more details: https://github.com/Teichlab/bbknn Park et al (2018) Fast Batch Alignment of Single Cell Transcriptomes Unifies Multiple Mouse Cell Atlases into an Integrated Landscape. bioRxiv:397042

install.packages("remotes")
remotes::install_github("TomKellyGenetics/bbknn")