Files in USCbiostats/BinaryDosage
Creates, Merges, and Reads Binary Dosage Files
.Rbuildignore
.gitignore
.travis.yml
BinaryDosage.Rproj
DESCRIPTION
NAMESPACE
NEWS.md
R/Merge.R
R/RcppExports.R
R/ReadBinaryDosage.R
R/WriteBinaryDosage.R
R/apply.R
R/convert.R
R/getinfo.R
R/getsnp.R
README.Rmd
README.md
appveyor.yml
codecov.yml
cran-comments.md
inst/WORDLIST
inst/extdata/aaf1a.rds
inst/extdata/bad1.imp
inst/extdata/bad1.info
inst/extdata/bad1.vcf
inst/extdata/bad2.info
inst/extdata/bad2.vcf
inst/extdata/bad3.vcf
inst/extdata/badversion.bdose
inst/extdata/set1a.imp
inst/extdata/set1a.info
inst/extdata/set1a.vcf
inst/extdata/set1a.vcf.gz
inst/extdata/set1a_nd.info
inst/extdata/set1a_nd.vcf.gz
inst/extdata/set1ars.vcf
inst/extdata/set1b.imp
inst/extdata/set1b.info
inst/extdata/set1b.vcf
inst/extdata/set1b_asnp.imp
inst/extdata/set1b_asnp.info
inst/extdata/set1b_asnp.vcf
inst/extdata/set1b_rssnp.imp
inst/extdata/set1b_rssnp.vcf
inst/extdata/set1b_rsub.imp
inst/extdata/set1b_rsub.info
inst/extdata/set1b_rsub.vcf
inst/extdata/set2a.imp
inst/extdata/set2a.sample
inst/extdata/set2a.vcf
inst/extdata/set2b.imp
inst/extdata/set2b.sample
inst/extdata/set2b.vcf
inst/extdata/set3a.imp
inst/extdata/set3a.sample
inst/extdata/set3a.sample1
inst/extdata/set3b.chr.imp
inst/extdata/set3b.imp
inst/extdata/set3b.sample
inst/extdata/set3bnh.sample
inst/extdata/set4a.imp.gz
inst/extdata/set4a.sample
inst/extdata/set4b.imp
inst/extdata/set4b.imp.gz
inst/extdata/set4b.sample
inst/extdata/set5a.imp.gz
inst/extdata/set5a.vcf.gz
inst/extdata/set5b.imp.gz
inst/extdata/set5b.vcf.gz
inst/extdata/set5c.imp.gz
inst/extdata/set5c.vcf.gz
inst/extdata/set5d.imp.gz
inst/extdata/set5d.vcf.gz
inst/extdata/test1.bdose
inst/extdata/test2.bdose
inst/extdata/test3.bdose
inst/extdata/vcf1a.bdose
inst/extdata/vcf1b.bdose
man/GetVCFInfo.Rd
man/bdapply.Rd
man/bdmerge.Rd
man/genapply.Rd
man/gentobd.Rd
man/getaaf.Rd
man/getbdinfo.Rd
man/getgeninfo.Rd
man/getmaf.Rd
man/getrsq.Rd
man/getsnp.Rd
man/vcfapply.Rd
man/vcftobd.Rd
src/.gitignore
src/FileInfo.cpp
src/Makevars
src/RcppExports.cpp
src/ReadBinaryDosage.cpp
src/WriteBinaryDosage.cpp
tests/testthat.R
tests/testthat/test-apply.R
tests/testthat/test-convert.R
tests/testthat/test-fileinfo_cpp.R
tests/testthat/test-filemismatch.R
tests/testthat/test-format-subformat.R
tests/testthat/test-getinfo.R
tests/testthat/test-getsnp.R
tests/testthat/test-merge.R
tests/testthat/test-reading.R
vignettes/.gitignore
vignettes/bdformats.Rmd
vignettes/geneticfileinfo.Rmd
vignettes/mergingfiles.Rmd
vignettes/r2estimates.Rmd
vignettes/usingbdfiles.Rmd
vignettes/usinggenfiles.Rmd
vignettes/usingvcffiles.Rmd
