USEPA/CompTox-ToxCast-tcplFit2: A Concentration-Response Modeling Utility

The tcplfit2 R package performs basic concentration-response curve fitting. The original tcplFit() function in the tcpl R package performed basic concentration-response curvefitting to 3 models. With tcplfit2, the core tcpl concentration-response functionality has been expanded to process diverse high-throughput screen (HTS) data generated at the US Environmental Protection Agency, including targeted ToxCast, high-throughput transcriptomics (HTTr) and high-throughput phenotypic profiling (HTPP). tcplfit2 can be used independently to support analysis for diverse chemical screening efforts.

Getting started

Package details

Maintainer
LicenseMIT + file LICENSE
Version0.1.7
URL https://github.com/USEPA/CompTox-ToxCast-tcplFit2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("USEPA/CompTox-ToxCast-tcplFit2")
USEPA/CompTox-ToxCast-tcplFit2 documentation built on Dec. 5, 2024, 8:23 a.m.