Vivianstats/MAAPER: Analysis of Alternative Polyadenylation Using 3' End-Linked Reads

A computational method developed for model-based analysis of alternative polyadenylation (APA) using 3' end-linked reads. It accurately assigns 3' RNA-seq reads to polyA sites through statistical modeling, and generates multiple statistics for APA analysis. Please also see Li WV, Zheng D, Wang R, Tian B (2021) <doi:10.1186/s13059-021-02429-5>.

Getting started

Package details

Maintainer
LicenseGPL-3
Version1.1.1
URL https://github.com/Vivianstats/MAAPER https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02429-5
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Vivianstats/MAAPER")
Vivianstats/MAAPER documentation built on Aug. 16, 2021, 9:47 p.m.