AdjustSIZE_fun | Adjust MME size estimate |
as_matrix | Rcpp version's as.matrix |
asMatrix | Rcpp version: as.matrix |
bayNorm | A wrapper function of prior estimation and bayNorm function |
bayNorm_sup | bayNorm with estimated parameters as input |
BB_Fun | Estimating size for each gene by either 1D or 2D maximization... |
BetaFun | Estimate capture efficiency for cells |
Check_input | Check input |
DownSampling | Binomial downsampling |
EstPrior | Estimate size and mu for Negative Binomial distribution for... |
EstPrior_rcpp | Estimate size and mu for Negative Binomial distribution for... |
EstPrior_sprcpp | Estimate size and mu for Negative Binomial distribution for... |
EXAMPLE_DATA_list | A subset of Grun et al (2014) data: 2i samples |
NOISY_FUN | Noisy gene detection |
noisy_gene_detection | A wrapper function for noisy gene detection from raw data.... |
Prior_fun | A wrapper function of 'EstPrior' and 'AdjustSIZE_fun' |
SyntheticControl | Generate synthetic control |
t_sp | Transpose of sparse matrix |
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