YanHanChen/PhD: Phylogenetic Diversity
(1) The iNEXT standardization for phylogenetic diversity: computes and plots rarefaction and extrapolation of phylogenetic diversity based on two types of standardization methods (sample size and sample coverage). (2) The phylogenetic diversity estimation: computes and plots asymptotic phylogenetic diversity profile as a function of diversity order (q-profile) or time (time-profile). PhD is an expanded and updated version of the old package iNextPD by adding more features. The iNextPD has been removed from CRAN. Use PhD to replace iNextPD.
Getting started
Browse package contents
Package details |
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| Author | Anne Chao, Yan-Han Chen and Chun-Huo Chiu |
| Maintainer | Anne Chao <chao@stat.nthu.edu.tw> |
| License | GPL (>= 3) |
| Version | 1.0.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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