Files in YosefLab/compassR
A Library for Conducting Analyses on COMPASS Data

DESCRIPTION

NAMESPACE

R/CompassAnalyzer.R R/CompassData.R R/CompassSettings.R R/cohens_d.R R/drop_constant_reactions.R R/drop_inconsistent_reactions.R R/get_annotations.R R/get_gene_expression_statistics.R R/get_metareaction_consistencies.R R/get_metareactions.R R/get_reaction_consistencies.R R/io.R README.md ex/differential_compass_scores_for_th17p_vs_th17n_cells.R ex/up_and_down_regulated_reactions_cross_pathway_boundaries.R

inst/extdata/RECON2/gene_metadata.csv

inst/extdata/RECON2/metabolite_metadata.csv

inst/extdata/RECON2/reaction_metadata.csv

inst/extdata/Th17/cell_metadata.csv

inst/extdata/Th17/linear_gene_expression_matrix.tsv

inst/extdata/Th17/reactions.tsv

man/CompassAnalyzer.Rd man/CompassData.Rd man/CompassSettings.Rd

YosefLab/compassR documentation built on May 3, 2021, 7:31 a.m.

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