API for Yunuuuu/rgeo
R interface for GEO database
| Global functions | |
|---|---|
| GEO-class | Man page |
| GEOData-class | Man page |
| GEOSeries-class | Man page |
| GEOSoft-class | Man page |
| `%||%` | Source code |
| accession | Man page |
| accession,GEOData-method | Man page |
| accession<- | Man page |
| accession<-,GEOData-method | Man page |
| build_geo_acc_url | Source code |
| build_geo_ftp_url | Source code |
| check_ids | Source code |
| column_to_rownames | Source code |
| columns | Man page |
| columns,GEOSoft-method | Man page |
| columns<- | Man page |
| columns<-,GEOSoft-method | Man page |
| datatable | Man page |
| datatable,GEOSoft-method | Man page |
| datatable<- | Man page |
| datatable<-,GEOSoft-method | Man page |
| download_and_parse_annotation | Source code |
| download_and_parse_soft | Source code |
| download_gds_files | Source code |
| download_geo_suppl_or_gse_matrix_files | Source code |
| download_gpl_files | Source code |
| download_gse_soft_files | Source code |
| download_gsm_files | Source code |
| download_inform | Source code |
| download_with_acc | Source code |
| download_with_ftp | Source code |
| get_geo | Man page Source code |
| get_geo_meta | Man page Source code |
| get_geo_soft | Source code |
| get_geo_suppl | Man page Source code |
| get_gse_matrix | Source code |
| gpl | Man page |
| gpl,GEOSeries-method | Man page |
| gpl2bioc | Source code |
| gpl<- | Man page |
| gpl<-,GEOSeries-method | Man page |
| gsm | Man page |
| gsm,GEOSeries-method | Man page |
| gsm<- | Man page |
| gsm<-,GEOSeries-method | Man page |
| has_bioc_annotation_pkg | Source code |
| ignore_unused_imports | Source code |
| is_download_success | Source code |
| is_log_trans | Source code |
| list_geo_file_url | Source code |
| log_trans | Man page Source code |
| meta | Man page |
| meta,GEOData-method | Man page |
| meta<- | Man page |
| meta<-,GEOData-method | Man page |
| new_geo_obj | Source code |
| parse_columns | Source code |
| parse_file_name | Source code |
| parse_gds_soft | Source code |
| parse_gds_subset | Source code |
| parse_geo_type | Source code |
| parse_gpl_or_gsm_soft | Source code |
| parse_gse_matrix | Source code |
| parse_gse_matrix_meta | Source code |
| parse_gse_matrix_sample_characteristics | Source code |
| parse_gse_soft | Source code |
| parse_gse_soft_sample_characteristics | Source code |
| parse_gsm_list | Man page Source code |
| parse_line_sep_by_equality | Source code |
| parse_line_sep_by_table | Source code |
| parse_meta | Source code |
| parse_name_value_pairs | Source code |
| parse_pdata | Man page Source code |
| preprocess_records | Source code |
| read_column | Source code |
| read_data_table | Source code |
| read_lines | Source code |
| read_meta | Source code |
| read_text | Source code |
| return_object_or_list | Source code |
| rgeo | Man page |
| rgeo-package | Man page |
| search_geo | Man page Source code |
| set_ftp_handle_opts | Source code |
| set_rownames | Source code |
| show,GEOData-method | Man page |
| show,GEOSeries-method | Man page |
| show,GEOSoft-method | Man page |
| show_geo | Man page Source code |
| str_detect | Source code |
| str_extract | Source code |
| str_extract_all | Source code |
| str_match | Source code |
| str_match_all | Source code |
| str_replace | Source code |
| str_replace_all | Source code |
| str_split | Source code |
| str_split_fixed | Source code |
| str_subset | Source code |
| str_which | Source code |
| wrap_cat | Source code |
