Man pages for YuriNiella/RSP
Refined Shortest Paths
| addCentroids | Add group centroid location to an existing plot |
| addRecaptures | Add recapture locations to an existing plot |
| addStations | Add receiver stations to an existing plot |
| animateTracks | Animate the RSP tracks |
| breakByTimeframe | Split detections every time "timeframe" hours pass. |
| calcRSP | Recreating RSP for a particular tracked animal |
| calculateDBBMM | Calculate the dBBMM for each group |
| checkDupTimestamps | Identify and remove duplicated timestamps |
| checkGroupQuality | Performs a series of quality checks on the detection data. |
| checkTrackPoints | Exclude tracks with less than 8 detections |
| checkTrackTimes | Exclude tracks shorter than 30 minutes: |
| clipLand | Clip land areas from the dbbmm output |
| combine | Combine a list of vectors |
| compileTrackInfo | compiles summary information for the tracks used in the dbbmm |
| dynBBMM | Total dynamic Brownian Bridge Movement Model |
| getAreas | Calculate water areas per group or track |
| getAreaStep | Calculate dBBMM and overlapping areas in steps |
| getCentroids | Get centroid locations of dBBMM |
| getDistances | Get total distances travelled |
| getDistPoint | Calculate in-water distances from RSP locations to a point of... |
| getOverlaps | Calculate overlaps between different groups |
| groupDetections | Prepare detections for the dBBMM |
| includeRSP | Recreating RSP for all tracked animals |
| input.example | Example acoustic data filtered with actel |
| minuteTime | Convert numeric time to HH:MM |
| nameTracks | Identify potential fine-scale data for analysis |
| pipe | Pipe operator |
| plotAreas | Plot areas |
| plotContours | Plot dynamic Brownian Bridge Movement Model (dBBMM) contours |
| plotDensities | Density plot of elapsed times between consecutive acoustic... |
| plotDistances | Plot total distances travelled |
| plotOverlaps | Plot overlapping contours |
| plotRaster | Check input data quality for the RSP analysis |
| plotTracks | Plot the RSP tracks |
| prepareDetections | Prepare detection data for RSP calculations |
| roundDown | Forcefully round a number down |
| roundUp | Forcefully round a number up |
| runRSP | Calculate refined shortest paths between detections |
| suggestSize | Suggest plot dimensions for a given raster |
| toUTM | Converts coordinates to UTM projection |
| trimDetections | Select specific transmitters to analyze |
