API for ZW-xjtlu/WhistleR
Comprehensive Annotation of Predictive Features for Interval-based Genomic Data
| Global functions | |
|---|---|
| Efficient_subRegion | Source code |
| EnsureUCSC | Source code |
| EnumerateRegionFeatures | Source code |
| MemorySaving_LetterFreq | Source code |
| Message_i | Source code |
| WhistlerUsersGuide | Man page Source code |
| calculate_total | Source code |
| distanceToNearesti | Source code |
| extractDistToRegion3end | Man page |
| extractDistToRegion3end,GRanges-method | Man page |
| extractDistToRegion5end | Man page |
| extractDistToRegion5end,GRanges-method | Man page |
| extractRegionLength | Man page |
| extractRegionLength,GRanges-method | Man page |
| extractRegionLetterFrequency | Man page |
| extractRegionLetterFrequency,GRanges-method | Man page |
| extractRegionNearestDistToY | Man page |
| extractRegionNearestDistToY,GRanges-method | Man page |
| extractRegionOverlap | Man page |
| extractRegionOverlap,GRanges-method | Man page |
| extractRegionProperty | Man page |
| extractRegionProperty,GRanges-method | Man page |
| extractRegionRelativePosition | Man page |
| extractRegionRelativePosition,GRanges-method | Man page |
| extractRegionScores | Man page |
| extractRegionScores,GRanges-method | Man page |
| extractRegionYCount | Man page |
| extractRegionYCount,GRanges-method | Man page |
| genomeDerivedFeatures | Man page Source code |
| grl_resolve_multi_strand | Source code |
| iRNA_encode | Source code |
| onehot_encode | Source code |
| quiet | Source code |
| range_unique_grl | Source code |
| sampleSequence | Man page Source code |
| sequenceDerivedFeatures | Man page Source code |
| topologyOnTranscripts | Man page Source code |
