aag1/LAMPA: LArge Multidomain Protein Annotator

Functional annotation of large multidomain proteins by iterative HH-suite-based procedure. The procedure utilizes fragments of a large multidomain protein sequence as queries to profile databases. It allows to avoid underestimation of statistical support that is often observed when standard tools are used to annotate large multidomain proteins.

Getting started

Package details

AuthorAnastasia A. Gulyaeva, Andrey I. Sigorskih, Elena S. Ocheredko, Alexander E. Gorbalenya
Maintainer
LicenseGPL (>=2)
Version1.0.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("aag1/LAMPA")
aag1/LAMPA documentation built on Jan. 27, 2020, 12:23 a.m.