adRn-s/deskPlink: Easy Testing Pheno-Geno Associations

A shiny graphical user interface (GUI) is available by calling the function: "run()". This enables users to input a VCF-formatted file (genetic information) and a table as comma separated values (CSV), with quantitative and/ or categorical variables as columns and rows matching each of the samples. Names in VCF and CSV need to match 1:1. PLINK is a variant association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. For more information please refer to upstream documentation at: https://www.cog-genomics.org/plink

install.packages("remotes")
remotes::install_github("adRn-s/deskPlink")