Man pages for adsteen/subspec
What the package does (one line)
| calc_inhib_slope | Calculate the slope of 1/nM.per.hr ~ conc.pNA; return it with... |
| calc_pNA_k | Calculates the exponential correction factor for fluorescence... |
| conceptual_fig | Makes Fig 1, a conceptual figure about substrate specificity |
| correct_for_pNA_quench | Corrects fluorescence for pNA quenching |
| corr_pNA_conc | Corrects pNA concentrations for my sloppy initial calculation |
| corr_stats | Returns useful parameters of a linear model |
| find_homologous | Finds pNA substrates homologous to a AMC substrates (i.e.,... |
| gauss | calculate a Gaussian distribution |
| get_nls_coefs | Gets coefficients and standard errors for an nls object |
| lm_stats | Returns statistics for linear regressions (e.g. slope,... |
| make_sat_curves | Analyzes and plots all saturation curves |
| plot_affinity_corr | Make plots of affinity correlations to DI, MW, and delta G of... |
| plot_all_inv_v0 | Makes fig 4 |
| plot_KI_norm_vs_Xaa_pNA | Make a faceted dotplot of KI/KI,ref for each Xaa-pNA, Yaa-AMC... |
| p_val_labeller | Returns nicely formatted p values |
| read_inhib_data | Reads in data frames, corrects bad data, and returns a master... |
| slope_and_SE | Calculate the slope and standard error of fluorescence vs... |
| write_paper | Master function to replicate all analyses in the manuscript |
