Files in agouy/straf
STR Analysis for Forensics
.Rbuildignore
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/doc_tabs.R
R/helpers.R
R/helpers_haplo_stats.R
R/module_data.R
R/module_file_conversion.R
R/module_for_popgen.R
R/module_pca_mds.R
R/module_reference_mds.R
R/runStraf.R
R/sidebar.R
R/straf.R
README.md
STRAF.Rproj
app.R
inst/CITATION
inst/application/server.R
inst/application/ui.R
inst/application/ui_files/acknowledgments.md
inst/application/ui_files/changelog.md
inst/application/ui_files/doc.md
inst/application/ui_files/license_ui.md
inst/application/ui_files/methods.R
inst/application/www/STRAF_logo.png
inst/application/www/STRidER_frequencies_2019-08-02.csv
inst/application/www/STRidER_frequencies_2024-09-24.csv
inst/application/www/bootstrap.css
inst/application/www/cover.png
inst/application/www/exampleGenepop.txt
inst/application/www/exampleSTRAFdiplo.txt
inst/application/www/exampleSTRAFhaplo.txt
inst/application/www/example_straf_pemberton13.txt
inst/application/www/strider_frequencies.rda
landing/custom.css
landing/img/cover.png
landing/img/logo.png
landing/index.Rmd
landing/index.html
man/about_tab.Rd
man/createGenind.Rd
man/data_Server.Rd
man/data_UI.Rd
man/documentation_tab.Rd
man/file_conv_Server.Rd
man/file_conv_UI.Rd
man/for_UI.Rd
man/for_popgen_Server.Rd
man/freq_to_mds.Rd
man/getFreqAllPop.Rd
man/getFreqFromGenind.Rd
man/getGenepopHW.Rd
man/getGenepopLD.Rd
man/getHaploStatsAllPop.Rd
man/getHaploStatsFromGenind.Rd
man/getIndicesAllPop.Rd
man/getIndicesFromGenind.Rd
man/get_2p2q2.Rd
man/get_hw_gp.Rd
man/get_ld_gp.Rd
man/pca_mds_Server.Rd
man/pca_mds_UI.Rd
man/plot_hap_dist.Rd
man/plot_hap_div.Rd
man/plot_ld.Rd
man/popgen_UI.Rd
man/poptree2straf.Rd
man/ref_mds_Server.Rd
man/ref_mds_UI.Rd
man/runStraf.Rd
man/sidebarUI.Rd
man/straf.Rd
man/straf2arlequin.Rd
man/straf2familias.Rd
man/straf2genepop.Rd
rsconnect/shinyapps.io/agouy/straf.dcf
scripts/.gitignore
scripts/generate_expectations.R
scripts/get_strider_data.R
scripts/hw_genepop.R
scripts/pemberton2013_straf.txt
scripts/process_pemberton_data.R
scripts/server.R
scripts/ui.R
tests/testthat.R
tests/testthat/exampleSTRAF_Excel.csv
tests/testthat/exampleSTRAFdiplo.txt
tests/testthat/exampleSTRAFdiplo_empty_lines.txt
tests/testthat/exampleSTRAFhaplo.txt
tests/testthat/exampleSTRAFhaplo_missing.txt
tests/testthat/exampleSTRAFhaplo_point.txt
tests/testthat/expectations.rds
tests/testthat/test_genepop_format.txt
tests/testthat/test_straf.R
