API for al-mcintyre/DEQ
A package to conveniently run DESeq2, edgeR, and QNB for the detection of differential methylation in MeRIP/m6A-seq data.
| Global functions | |
|---|---|
| .betabinomial.lh | Source code |
| .help.digamma | Source code |
| .help.factorial | Source code |
| .help.postprob | Source code |
| .help.trigamma | Source code |
| annotate.peaks | Source code |
| count.reads | Source code |
| deq | Man page Source code |
| diff.call.module | Source code |
| get.gene.counts | Source code |
| import.peaks | Source code |
| run.deseq2 | Source code |
| run.deseq2.4l2fc | Source code |
| run.edger | Source code |
| run.metdiff | Source code |
| run.qnb | Source code |
| run.tools | Source code |
