| Fst | Fixation Index |
| gibbs | Bayesian Mixed Model |
| gmm | Genomic mixed model |
| gwas | Empirical Bayes Genome Wide Association Mapping |
| Internals | Internal functions |
| Manhattan | Manhattan plot for Association Studies |
| met | Multi-environmental trial |
| NAM-package | Nested Association Mapping |
| reml | Restricted Maximum Likelihood |
| snpH2 | SNP heritability |
| snpQC | SNP Quality Control |
| tpod | Tetra-seed Pods |
| wgr | Genome-wide prediction |
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