API for alessandrozito/BayesANT
Bayesian Nonparametric Taxonomic classifier
| Global functions | |
|---|---|
| BayesANT | Man page Source code |
| BayesANT_amino | Man page Source code |
| Mom_dirichlet | Source code Source code |
| add_novelty_to_test_data | Man page Source code |
| build_CountMatrix | Source code |
| build_ParameterMatrix | Source code |
| build_ParameterMatrix_from_Kmers | Source code |
| compute_probs | Source code |
| compute_probs_MultKmers | Source code |
| create_gaps | Source code |
| extract_2mers | Source code |
| fitPY | Source code |
| fitPY_tree | Source code |
| get_2mer_counts | Source code |
| get_Kmer_counts | Source code |
| get_Priorprobs_PY | Source code |
| get_Priorprobs_noNewSpecies | Source code |
| get_nucleotide_counts | Source code |
| get_proportions | Source code |
| logEPPF_PY | Source code |
| logEPPF_PY_pooled | Source code |
| log_MultKmers_cpp | Source code |
| make_xy_plot | Source code |
| max_EPPF_PY | Source code |
| max_EPPF_PY_pooled | Source code |
| obtain_prediction | Source code |
| plot_accuracies | Man page Source code |
| predict.BayesANT | Man page Source code |
| predict_Taxonomy_aligned | Source code |
| predict_Taxonomy_not_alinged | Source code |
| read.BayesANT.data | Man page Source code |
| read.BayesANT.testDNA | Man page Source code |
| summary.BayesANT | Man page Source code |
| tune_hyperparameters | Source code |
| tune_hyperparameters_MultKmers | Source code |
