almeidasilvaf/SoyInsectGCN: Gene coexpression network of soybean infested with pests

This is a Shiny app to explore a gene coexpression network inferred from RNA-seq data of soybean tissues infested with insects and nematodes. Users can input a gene ID and explore its degree, hub status, module, and module's enriched pathways and biological processes. A network plot is also displayed for each module, with the input gene highlighted.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("almeidasilvaf/SoyInsectGCN")
almeidasilvaf/SoyInsectGCN documentation built on Dec. 19, 2021, 1:33 a.m.