alxsrobert/measlesoutbreaker: Reconstruction of Transmission Chains from Surveillance Data
Bayesian reconstruction of who infected whom during past outbreaks using routinely-collected surveillance data. Inference of transmission trees using genotype, age specific social contacts, distance between cases and onset dates of the reported cases. (Robert A, Kucharski AJ, Gastanaduy PA, Paul P, Funk S. (2020) <doi:10.1098/rsif.2020.0084>).
Getting started
Browse package contents
Package details |
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| Maintainer | Alexis Robert <alexis.robert@lshtm.ac.uk> |
| License | MIT + file LICENSE |
| Version | 1.1.3 |
| URL | https://github.com/alxsrobert/o2geosocial |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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