| adjacency | Computes adjacency matrix given similarity matrix. Each... |
| degree | Compute matrix with degree of each vertex on the diagonal |
| HCLUST | Perform Hierarchical Clustering |
| laplacian | Calculates graph Laplacian given adjacency and degree... |
| nearestNeighbors | Computes K-nearest neighbors of given observation |
| pairwiseDistance | Compute matrix of pairwise Euclidean distance between... |
| similarity | Computes radial-kernel gram matrix to use as similarity... |
| SPECC | Performs Spectral Clustering |
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