Man pages for annakat/spectrolab
Class and Methods for Spectral Data
| aggregate.spectra | Aggregate spectra |
| apply_by_band | Apply numeric function by band |
| as.data.frame.spectra | Convert spectra to data.frame |
| as.matrix.spectra | Convert spectra to matrix |
| as_spectra | Convert matrix or data frame to spectra |
| as_spectra.data.frame | Convert data.frame to spectra |
| as_spectra.matrix | Convert matrix to spectra |
| bands | Get spectra band labels |
| bands-set | Set band labels |
| combine | Combine spectral datasets |
| default_spec_regions | Return default spectral regions matrix |
| dim.spectra | Get dimension of spectra |
| guess_splice_at | Guess splice bands (bounds between senors) |
| i_bands | Internal band constructor for spectra |
| i_find_sensor_overlap_bounds | Find sensor overlap bounds |
| i_index_pairwise_combn | Pairwise index combinations |
| i_is_increasing | Is increasing |
| i_is_index | Compatible with being an index? |
| i_is_whole | Is whole number? |
| i_match_ij_spectra | Get internal indexes for spectra attributes |
| i_match_label | Match label |
| i_match_label_or_idx | Match label or index |
| i_mav | Moving Average |
| i_meta | Internal metadata constructor for spectra |
| i_mind_the_gap_smoothing | Warn if gap between bands is too wide |
| i_names | Internal constructor for sample names |
| i_plot_boundaries | Find plot boundaries in user space |
| i_plot_exists | Tests if a plot device exists |
| i_read_ascii_metadata | Read metadata |
| i_read_ascii_spectra | Internal parser for ASCII format |
| i_read_asd_spectra | Parser for ASD's '.asd' |
| is_spectra | Is it a spectra object? |
| i_trim_sensor_overlap | Trim sensor overlap |
| i_value | Internal constructor for value matrix |
| i_verify_path_and_format | Internal function to verify file paths and format |
| match_sensors | Match spectra at sensor transitions |
| max.spectra | Maximum value |
| mean.spectra | Mean spectrum |
| median.spectra | Median spectrum |
| meta | Get metadata |
| meta-set | Set metadata |
| min.spectra | Minimum value |
| names-set-.spectra | Set spectra sample names |
| names.spectra | Get spectra sample names |
| normalize | Vector normalize spectra |
| Ops.spectra | Arithmetic operators for spectra |
| pairwise_indices | Pairwise indices |
| pairwise_ratio | Pairwise value ratios |
| plot_interactive | Plot spectra interactively |
| plot_quantile | Plot spectra quantiles |
| plot_regions | Plot polygons for spectral regions |
| plot.spectra | Plot spectra |
| print.spectra | Print spectra |
| quantile.spectra | Compute spectra quantiles |
| range.spectra | Range of spectral values |
| read_spectra | Read files from various formats into 'spectra' |
| resample | Resample spectra |
| sd | Standard deviation |
| sd.default | Default variance |
| sd.spectra | Standard deviation spectrum |
| smooth | Generic Smoothing function |
| smooth.default | Default smoothing function |
| smooth_moving_avg | Smooth moving average for spectra |
| smooth.spectra | Smooth spectra |
| smooth_spline | Smooth spline functions for spectra |
| spec_matrix_example | Example spectral dataset |
| spectra | Spectra object constructor |
| spectrolab | Spectrolab |
| split.spectra | Split spectra |
| str.spectra | Structure of the spectra object |
| subset_by | Subset spectra by factor |
| subset-.spectra | Assign values to spectra |
| sub-.spectra | Subset spectra |
| summary.spectra | Summarize spectra |
| try_keep_txt | Wrap function to try to keep text |
| t.spectra | Spectra Transpose |
| value | Get spectra value |
| value-set | Set spectra value |
| var | Variance |
| var.default | Variance |
| var.spectra | Variance spectrum |
