Files in arca-dpss/manual-open-science
The Open Science Manual: Make Your Scientific Research Accesible and Reproducible
.Rbuildignore
.Rprofile
.github/.gitignore
.github/workflows/deploy_bookdown.yml
.gitignore
.zenodo.json
CITATION.cff
DESCRIPTION
LICENSE
NEWS.md
R/my-functions.R
R/targets-utils.R
R/utils-book.R
R/utils.R
README.Rmd
README.md
_bookdown.yml
_output.yml
_targets.yaml
analysis/_targets/.gitignore
analysis/_targets/meta/meta
analysis/targets-analysis.R
analysis/targets-workflow.R
assets/bib/apa.csl
assets/bib/book.bib
assets/bib/manual-open-science.bib
assets/bib/packages.bib
assets/css/custom.css
assets/css/style.css
assets/css/toc.css
assets/html/banner.html
assets/html/footer.html
assets/images/arca-logo.png
assets/images/banner.png
assets/images/design.png
assets/images/doc-links.png
assets/images/foil-machine.png
assets/images/gears.png
assets/images/gotcha.png
assets/images/hat.png
assets/images/lightbulb.png
assets/tex/frontpage.tex
assets/tex/preamble.tex
chapters/01-intro.Rmd
chapters/02-osf.Rmd
chapters/03-projects.Rmd
chapters/04-data.Rmd
chapters/05-coding.Rmd
chapters/06-terminal.Rmd
chapters/07-git.Rmd
chapters/08-github.Rmd
chapters/09-workflow.Rmd
chapters/10-dynamic-documents.Rmd
chapters/11-requirements.Rmd
chapters/12-docker.Rmd
chapters/13-rocker.Rmd
chapters/99-references.Rmd
data/README.md
data/raw-data.csv
documents/_targets.yaml
documents/apa.csl
documents/bib-example.bib
documents/css/custom.css
documents/css/logo_arca.png
documents/figures/logo_arca.png
documents/report.Rmd
documents/report.html
images/arca-logo.pdf
images/arca-logo.png
images/cc-nc-sa.png
images/coding/adv-r.png
images/coding/coding.drawio
images/coding/coding.png
images/coding/create-pkg.png
images/coding/devtools.png
images/coding/fun-env.png
images/coding/glob-env-2.png
images/coding/glob-env.png
images/coding/hopr.png
images/coding/r-pkgs.png
images/coding/r4ds.png
images/coding/roxygen2.png
images/coding/rstudio-indent.png
images/coding/rstudio-line.png
images/coding/settings-doc.png
images/coding/test-that.png
images/data/databrary.png
images/data/dataverse.png
images/data/encoding.png
images/data/github.png
images/data/gitlab.png
images/data/icpsr.png
images/data/osf.png
images/docker/Docker-elements.drawio
images/docker/Docker-elements.png
images/docker/VSC-docker.png
images/docker/VSC-logo.png
images/docker/container-vs-vm.png
images/docker/docker-desktop-1.png
images/docker/docker-hub-logo.png
images/docker/docker-logo.png
images/dynamic-documents/quarto-logo.png
images/dynamic-documents/trackdown-hide-code.png
images/dynamic-documents/trackdown-logo.png
images/dynamic-documents/trackdown-rich-text.png
images/dynamic-documents/trackdown-workflow.png
images/git/branch-extra.png
images/git/branch.png
images/git/checkout-diverge.png
images/git/checkout.png
images/git/collaborate.png
images/git/git-logo.png
images/git/git-settings-1.png
images/git/history.png
images/git/icon-added.png
images/git/icon-conflict.png
images/git/icon-deleted.png
images/git/icon-modified.png
images/git/icon-renamed.png
images/git/icon-untraked.png
images/git/local-work-1.png
images/git/local-work-2.png
images/git/merge-1.png
images/git/merge-2.png
images/git/merge-extra.png
images/git/panel-base-1.png
images/git/panel-base-2.png
images/git/panel-base-3.png
images/git/panel-base-4.png
images/git/panel-base-5.png
images/git/panel-base.png
images/git/panel-commit-2.png
images/git/panel-commit.png
images/git/panel-files.png
images/git/panel-history-2.png
images/git/panel-history.png
images/git/panel-new-branch.png
images/git/panel-revert.png
images/git/panel-stage.png
images/git/pull.png
images/git/push.png
images/git/reset.png
images/git/revert.png
images/git/rstudio-clone-1.png
images/git/rstudio-clone-2.png
images/git/rstudio-clone-3.png
images/git/rstudio-diff-1.png
images/git/rstudio-diff-2.png
images/git/rstudio-git.png
images/git/rstudio-new-proj.png
images/git/track-changes.drawio
images/git/workflow-adv-1.png
images/git/workflow-adv-2.png
images/git/workflow.png
images/github/GitHub-logo.png
images/github/git-settings-2.png
images/github/github-add-collaborators-2.png
images/github/github-add-collaborators.png
images/github/github-clone.png
images/github/github-create-new-repo.png
images/github/github-diff.png
images/github/github-empty-repo.png
images/github/github-fork-fetch.png
images/github/github-fork.png
images/github/github-history.png
images/github/github-issues.png
images/github/github-license-commit.png
images/github/github-license-create.png
images/github/github-license-template.png
images/github/github-new-file.png
images/github/github-new-repo.png
images/github/github-pr-available.png
images/github/github-pr-create.png
images/github/github-pr-open-2.png
images/github/github-profile-settings-2.png
images/github/github-profile-settings.png
images/github/github-readme-2.png
images/github/github-repo-menu-issues.png
images/github/github-repo-menu.png
images/github/github-repo-readme.png
images/github/github-sign-in.png
images/github/github-ssh-keys.png
images/github/github-ssh-new.png
images/github/rstudio-ssh.png
images/github/zenodo-logo.png
images/osf/anonymize-link-2.png
images/osf/anonymize-link.png
images/osf/cos-logo.png
images/osf/osf-add-files.png
images/osf/osf-contributors.png
images/osf/osf-document.png
images/osf/osf-doi.png
images/osf/osf-home.png
images/osf/osf-link.png
images/osf/osf-login.png
images/osf/osf-logo.png
images/osf/osf-new-project.png
images/osf/osfr-logo.png
images/osf/project-dashboard-1.png
images/osf/project-dashboard-2.png
images/osf/project-dashboard-3.png
images/osf/project-dashboard-4.png
images/osf/project-visibility.png
images/osf/user-home.png
images/projects/by-credits.png
images/projects/cc-by-sa.png
images/projects/general-options.png
images/projects/hidden-files.png
images/projects/new-proj-1.png
images/projects/new-proj-2.png
images/projects/new-proj-3.png
images/projects/new-proj-4.png
images/projects/no-derivatives.png
images/projects/non-commercial.png
images/projects/proj-files.png
images/projects/proj-icon.png
images/projects/proj-menu.png
images/projects/proj-options.png
images/projects/proj-wd.png
images/projects/restart-session.png
images/projects/rprofile.png
images/projects/rproj-file.png
images/projects/settings-UTF8.png
images/projects/share-alike.png
images/requirements/cache-package.png
images/requirements/cache-revrsion.png
images/requirements/lock-file.png
images/requirements/proj-folder.png
images/requirements/proj-library.png
images/requirements/renv-actions.png
images/requirements/renv-active.png
images/requirements/renv-folder.png
images/requirements/renv-hex.png
images/requirements/renv-rprofile.png
images/requirements/use-renv.png
images/rocker/RStudio-Server-export.png
images/rocker/RStudio-Server-interface.png
images/rocker/RStudio-Server-login.png
images/rocker/RStudio-Server-upload.png
images/rocker/rocker-logo.png
images/terminal/current-shell.png
images/terminal/new-terminal.png
images/terminal/terminal-panel.png
images/terminal/terminal-settings.png
images/terminal/terminal.png
images/workflow/nav-bottom.png
images/workflow/nav-top.png
images/workflow/pipeline-end.png
images/workflow/pipeline-new-data.png
images/workflow/pipeline-new-function.png
images/workflow/pipeline-report-wrong.png
images/workflow/pipeline-report.png
images/workflow/pipeline-start.png
images/workflow/report-analysis-wrong.png
images/workflow/report-analysis.png
images/workflow/script-collapsed.png
images/workflow/script-sections.png
images/workflow/targets-hex.png
index.Rmd
manual-open-science.Rproj
parskip.sty
renv.lock
renv/.gitignore
renv/activate.R
renv/settings.dcf
trackdown-manager.R
