Files in avallonking/LRTq
Rare variant association test for quantitative traits with likelihood ratio test
.gitignore
DESCRIPTION
LICENSE
LRTq.Rproj
NAMESPACE
R/RcppExports.R
README.md
analysis_scripts/cosi/params.only_eu.txt
analysis_scripts/figures/.ipynb_checkpoints/Supplemental_Fig_S1-3-checkpoint.ipynb
analysis_scripts/figures/.ipynb_checkpoints/Supplemental_Fig_S7-checkpoint.ipynb
analysis_scripts/figures/.ipynb_checkpoints/Supplemental_Fig_S8-checkpoint.ipynb
analysis_scripts/figures/Fig1.R
analysis_scripts/figures/Fig2.R
analysis_scripts/figures/Fig3.R
analysis_scripts/figures/Fig4.R
analysis_scripts/figures/Supplemental_Fig_S1-3.ipynb
analysis_scripts/figures/Supplemental_Fig_S12.R
analysis_scripts/figures/Supplemental_Fig_S13.R
analysis_scripts/figures/Supplemental_Fig_S4.R
analysis_scripts/figures/Supplemental_Fig_S5.R
analysis_scripts/figures/Supplemental_Fig_S6.R
analysis_scripts/figures/Supplemental_Fig_S7.ipynb
analysis_scripts/figures/Supplemental_Fig_S8.ipynb
analysis_scripts/figures/Supplemental_Fig_S9-11.R
analysis_scripts/figures/Table1.R
analysis_scripts/gtex/association_tests/acat.R
analysis_scripts/gtex/association_tests/acat.regress_out_common_eqtls.R
analysis_scripts/gtex/association_tests/faster.gtex_power_test.modified.fixed.more_perm.speed_up.other_tissues.R
analysis_scripts/gtex/association_tests/faster.gtex_power_test.modified.fixed.more_perm.speed_up.other_tissues.maf01.R
analysis_scripts/gtex/association_tests/faster.gtex_power_test.modified.fixed.more_perm.speed_up.other_tissues.regress_out_common_eqtls.R
analysis_scripts/gtex/association_tests/methods_source/lrt.cpp
analysis_scripts/gtex/association_tests/methods_source/rareVariantTests.functions_only.R
analysis_scripts/gtex/statistical_analysis/all_tissues.egene.outliers.log2.standardized.corrected_tpm.only.R
analysis_scripts/gtex/statistical_analysis/all_tissues.non_egene.outliers.log2.standardized.corrected_tpm.only.R
analysis_scripts/gtex/statistical_analysis/all_tissues.tissue_sharing.prop.num_shared_egenes.all.cv.rv.egenes.R
analysis_scripts/gtex/statistical_analysis/all_tissues.tissue_sharing.shared_egenes.qval.corr.R
analysis_scripts/gtex/statistical_analysis/new_rv_egene_analysis.ipynb
analysis_scripts/gtex/statistical_analysis/non-rv-egene-enrichment.ipynb
analysis_scripts/gtex/statistical_analysis/regress_out_common_eqtls.ipynb
analysis_scripts/gtex/statistical_analysis/result.stat.R
analysis_scripts/simulation/lrt.cpp
analysis_scripts/simulation/power.simulate.new.R
analysis_scripts/simulation/typeIerror.simulation.new.R
man/LRTq-package.Rd
src/LRTq.cpp
src/LRTq.o
src/LRTq.so
src/RcppExports.cpp
src/RcppExports.o
src/symbols.rds
