Files in ayurovsky/rnaGinesis
Simulate gene expression data
DESCRIPTION
LICENSE
NAMESPACE
R/Complete_simulation.R
R/NMF_analyze.R
R/add_error.R
R/calculate_initial_mu_and_A.R
R/evalCOSDIST.R
R/evalH.RMSE.R
R/evalRMSE.R
R/evalW.COSDIST.R
R/makeCentroid.R
R/makeH.RMSE.R
R/makeW_COSDIST.R
R/make_W.R
R/parse.muraro.R
R/parseGSE19830_LiverLungBrainRaw.R
R/rearrange.R
R/rearrangeResult.R
R/runNMF.R
R/sim_H.R
R/sim_data.R
R/sim_data_1.R
R/simulate_and_test.R
R/sortMu.R
R/subsetCentroid.R
R/sum_to_1.R
R/tot.cor.R
R/tot.rmse.R
README.md
data/A.RData
data/Dataset_LiverLungBrain.NMF.result.RData
data/Dataset_LiverLungBrain.RData
data/Dataset_ResampledSingleCell.NMF.result.RData
data/Dataset_ResampledSingleCell.RData
data/Dataset_Simulation.NMF.result.RData
data/Dataset_Simulation.RData
data/TCGA_PAAD.RData
data/datasetGSE19830_LiverLungBrainRaw.RData
data/mu.RData
data/muraro.RData
inst/extdata/Long_Demo.Rmd
inst/extdata/Long_Demo.pdf
inst/extdata/Short_Demo.Rmd
inst/extdata/Short_Demo.pdf
inst/extdata/make_Dataset_LiverLungBrain.Rmd
inst/extdata/make_Dataset_ResampledSingleCell.Rmd
inst/extdata/make_Dataset_Simulation.Rmd
inst/extdata/plot_Dataset_LiverLungBrain.Rmd
inst/extdata/plot_Dataset_ResampledSingleCell.Rmd
inst/extdata/plot_Dataset_Simulation.Rmd
inst/extdata/run_Dataset_LiverLungBrain.Rmd
inst/extdata/run_Dataset_ResampledSingleCell.Rmd
inst/extdata/run_Dataset_Simulation.NMF.Rmd
install.dependencies.R
man/Complete_simulation.Rd
man/NMF_analyze.Rd
man/add_error.Rd
man/calculate_initial_mu_and_A.Rd
man/evalCOSDIST.Rd
man/evalH.RMSE.Rd
man/evalRMSE.Rd
man/makeCentroid.Rd
man/make_W.Rd
man/parseGSE19830_LiverLungBrainRaw.Rd
man/rearrange.Rd
man/rearrangeResult.Rd
man/runNMF.Rd
man/sim_H.Rd
man/sim_data.Rd
man/sim_data_1.Rd
man/simulate_and_test.Rd
man/sortMu.Rd
man/subsetCentroid.Rd
man/sum_to_1.Rd
man/tot.cor.Rd
man/tot.rmse.Rd
