Man pages for beadyallen/MGnifyR
R interface to EBI MGnify metagenomics resource
| deprecate | These functions will be deprecated. Please use other... |
| doQuery | Search MGnify database for studies, samples, runs, analyses,... |
| getData | Versatile function to retrieve raw results |
| getFile | Download any MGnify files, also including processed reads and... |
| getMetadata | Get all study, sample and analysis metadata for the supplied... |
| getResult | Get microbial and/or functional profiling data for a list of... |
| MgnifyClient | Constructor for creating a MgnifyClient object to allow the... |
| MgnifyClient-accessors | MgnifyClient accessors and mutators |
| MGnifyR-package | 'MGnifyR' Package. |
| searchAnalysis | Look up analysis accession IDs for one or more study or... |
